RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 GCHFRP30047 84 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 SNRPD3P62318 126 aaKnown RBP9.07□□□□□ -0.96
USP6-206ENST00000575709 TRAV30A0A087WSZ9 112 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 THY1P04216 161 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 KIR3DS1Q14943 382 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 FAM78AQ5JUQ0 283 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 FBXW9Q5XUX1 488 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 RPP21Q9H633 154 aaKnown RBP9.07□□□□□ -0.96
USP6-206ENST00000575709 RGPD5Q99666 1765 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 IGHV3-66A0A0C4DH42 116 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 TMEM222Q9H0R3 208 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 C4AP0C0L4 1744 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 C4BP0C0L5 1744 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 ANKRD36CQ5JPF3 1778 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 KCNE1BA0A087WTH5 132 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 C3P01024 1663 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 POLR2AP24928 1970 aaKnown RBP9.07□□□□□ -0.96
USP6-206ENST00000575709 SOX8P57073 446 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 CLEC2AQ6UVW9 174 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 WFDC12Q8WWY7 111 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 COL14A1Q05707 1796 aaKnown RBP9.07□□□□□ -0.96
USP6-206ENST00000575709 TRBV20-1A0A075B6N2 111 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 CNRIP1Q96F85 164 aaPredicted RBP9.07□□□□□ -0.96
USP6-206ENST00000575709 VSTM2LQ96N03 204 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 CHST5Q9GZS9 411 aa9.07□□□□□ -0.96
USP6-206ENST00000575709 TMEM229AB2RXF0 380 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 H3BMM0 161 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 TNFSF13O75888 250 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 ICAM4Q14773 271 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 FAM219BQ5XKK7 198 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 ATRAIDQ6UW56 229 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 DLK2Q6UY11 383 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 OR11H4Q8NGC9 324 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 TSSC4Q9Y5U2 329 aaPredicted RBP9.06□□□□□ -0.96
USP6-206ENST00000575709 RP1L1Q8IWN7 2480 aaPredicted RBP9.06□□□□□ -0.96
USP6-206ENST00000575709 PRB2P02812 416 aaPredicted RBP9.06□□□□□ -0.96
USP6-206ENST00000575709 C2orf68Q2NKX9 166 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 GTSCR1Q86UQ5 136 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 C10orf35Q96D05 121 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 MRPS18BQ9Y676 258 aaKnown RBP9.06□□□□□ -0.96
USP6-206ENST00000575709 R4GN57 208 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 TNRC6AQ8NDV7 1962 aaKnown RBP9.06□□□□□ -0.96
USP6-206ENST00000575709 A0A1W2PQF6 199 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 RPL8P62917 257 aaKnown RBP9.06□□□□□ -0.96
USP6-206ENST00000575709 DNAJC30Q96LL9 226 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 FOXQ1Q9C009 403 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 LHX2P50458 406 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 H2BFSP57053 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 TMEM240Q5SV17 173 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 TMEM131LA2VDJ0 1609 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 MED12Q93074 2177 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 A0A087WWC5 75 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 CDC42EP2O14613 210 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 UNC119Q13432 240 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 NPCDR1Q9BY65 106 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 RNASE7Q9H1E1 156 aaKnown RBP9.06□□□□□ -0.96
USP6-206ENST00000575709 GFRA3O60609 400 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 CGAP01215 116 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 SRSF1Q07955 248 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP6-206ENST00000575709 INO80CQ6PI98 192 aaPredicted RBP9.06□□□□□ -0.96
USP6-206ENST00000575709 TMEM170AQ8WVE7 144 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 FMC1Q96HJ9 113 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 SCRT1Q9BWW7 348 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 SIT1Q9Y3P8 196 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 SHPRHQ149N8 1683 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BKO60814 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BJP06899 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BOP23527 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BBP33778 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BDP58876 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BCP62807 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 C3AR1Q16581 482 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST2H2BEQ16778 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 PRSS53Q2L4Q9 553 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BHQ93079 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 DUX3Q96PT4 197 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BNQ99877 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BMQ99879 126 aa9.06□□□□□ -0.96
USP6-206ENST00000575709 HIST1H2BLQ99880 126 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 MRPL32Q9BYC8 188 aaKnown RBP9.05□□□□□ -0.96
USP6-206ENST00000575709 SEMA5BQ9P283 1151 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 KLHDC2Q9Y2U9 406 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 CARHSP1Q9Y2V2 147 aaKnown RBP9.05□□□□□ -0.96
USP6-206ENST00000575709 NEURL4Q96JN8 1562 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 AGFG2O95081 481 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 TMEM238C9JI98 176 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 ZG16O60844 167 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 SCTP09683 121 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 PNLIPP16233 465 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 STARD6P59095 220 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 FOXL1Q12952 345 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 CD300EQ496F6 205 aaPredicted RBP9.05□□□□□ -0.96
USP6-206ENST00000575709 ANKRD29Q8N6D5 301 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 LRTM2Q8N967 370 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 NKX2-2O95096 273 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 PEAR1Q5VY43 1037 aaPredicted RBP9.05□□□□□ -0.96
USP6-206ENST00000575709 TDHQ8IZJ6 230 aa9.05□□□□□ -0.96
USP6-206ENST00000575709 BAALCQ8WXS3 180 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms