RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 ANXA3P12429 323 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 UBE2MP61081 183 aaKnown RBP12.39□□□□□ -0.43
CCNE1-204ENST00000574121 SLC35B1P78383 322 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 FXYD3Q14802 87 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 MRGPRG-AS1Q2M3A8 158 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 ADAD2Q8NCV1 583 aaKnown RBP12.39□□□□□ -0.43
CCNE1-204ENST00000574121 GLYATL2Q8WU03 294 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 ARPC1AQ92747 370 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 CLCC1Q96S66 551 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
CCNE1-204ENST00000574121 TMEM140Q9NV12 185 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 TBC1D24Q9ULP9 559 aa12.39□□□□□ -0.43
CCNE1-204ENST00000574121 COL6A5A8TX70 2615 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 LINC01548A6NM66 108 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 HAX1O00165 279 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 ATP6V0E1O15342 81 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 CNIH1O95406 144 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 CDS2O95674 445 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 KRASP01116 189 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 AKR1C4P17516 323 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 VDAC1P21796 283 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 RPL8P62917 257 aaKnown RBP12.38□□□□□ -0.43
CCNE1-204ENST00000574121 SRPXP78539 464 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 NDPQ00604 133 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 TMEM267Q0VDI3 215 aaPredicted RBP12.38□□□□□ -0.43
CCNE1-204ENST00000574121 PJVKQ0ZLH3 352 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 TRIM16LQ309B1 348 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 SHISA2Q6UWI4 295 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 SSX9Q7RTT3 188 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 TMED4Q7Z7H5 227 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 CENPVQ7Z7K6 275 aaPredicted RBP12.38□□□□□ -0.43
CCNE1-204ENST00000574121 COMMD1Q8N668 190 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 SGMS2Q8NHU3 365 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 IL22RA2Q969J5 263 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 SEC22AQ96IW7 307 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 TMEM68Q96MH6 324 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 PARP11Q9NR21 331 aa12.38□□□□□ -0.43
CCNE1-204ENST00000574121 PSMB11A5LHX3 300 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 UPK2O00526 184 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 IGKV1-39P01597 117 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 IGKV1D-39P04432 117 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 G6PCP35575 357 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 DEFA1P59665 94 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 DEFA3P59666 94 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 SUPT4H1P63272 117 aaKnown RBP12.37□□□□□ -0.43
CCNE1-204ENST00000574121 SSBP2P81877 361 aaPredicted RBP12.37□□□□□ -0.43
CCNE1-204ENST00000574121 IFITM3Q01628 133 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 TNXAQ16473 311 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 SP6Q3SY56 376 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 AKIRIN2Q53H80 203 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 SLC25A42Q86VD7 318 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 TMEM56Q96MV1 263 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 NOL4LQ96MY1 436 aaPredicted RBP12.37□□□□□ -0.43
CCNE1-204ENST00000574121 NUBP2Q9Y5Y2 271 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 TMEM56-RWDD3S4R434 201 aa12.37□□□□□ -0.43
CCNE1-204ENST00000574121 TRAV41A0A0B4J266 112 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 ARPC1BO15143 372 aaKnown RBP12.36□□□□□ -0.43
CCNE1-204ENST00000574121 SNAPC5O75971 98 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 TCRBP04435 133 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 EGR2P11161 476 aaPredicted RBP12.36□□□□□ -0.43
CCNE1-204ENST00000574121 HLA-GP17693 338 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 GNB1P62873 340 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 CFHR3Q02985 330 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 TMEM187Q14656 261 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 C19orf54Q5BKX5 351 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 H2BFWTQ7Z2G1 175 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 FAM219AQ8IW50 185 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 OR5AU1Q8NGC0 362 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 OR4X2Q8NGF9 303 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 ABHD5Q8WTS1 349 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 SRSF12Q8WXF0 261 aaKnown RBP12.36□□□□□ -0.43
CCNE1-204ENST00000574121 RBPMSQ93062 196 aaKnown RBP12.36□□□□□ -0.43
CCNE1-204ENST00000574121 SPIN2AQ99865 258 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 CITED1Q99966 193 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 SPIN2BQ9BPZ2 258 aa12.36□□□□□ -0.43
CCNE1-204ENST00000574121 ALX4Q9H161 411 aaPredicted RBP12.36□□□□□ -0.43
CCNE1-204ENST00000574121 FAM240BA0A1B0GVZ2 78 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 IGHG4P01861 327 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 AKR1C2P52895 323 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 ZNF695Q8IW36 515 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 MINDY2Q8NBR6 621 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 GRPEL2Q8TAA5 225 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 RRNAD1Q96FB5 475 aaKnown RBP12.35□□□□□ -0.43
CCNE1-204ENST00000574121 C20orf85Q9H1P6 137 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 PALMDQ9NP74 551 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 FKBP11Q9NYL4 201 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 LINC00527Q9UJ94 153 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 PRNDQ9UKY0 176 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 FBXO7Q9Y3I1 522 aa12.35□□□□□ -0.43
CCNE1-204ENST00000574121 FBXO24O75426 580 aa12.34□□□□□ -0.43
CCNE1-204ENST00000574121 ELANEP08246 267 aa12.34□□□□□ -0.43
CCNE1-204ENST00000574121 VAMP1P23763 118 aa12.34□□□□□ -0.43
CCNE1-204ENST00000574121 PPIFP30405 207 aaKnown RBP12.34□□□□□ -0.43
CCNE1-204ENST00000574121 FOXE3Q13461 319 aa12.34□□□□□ -0.43
CCNE1-204ENST00000574121 TMEM268Q5VZI3 342 aa12.34□□□□□ -0.43
CCNE1-204ENST00000574121 THOC7Q6I9Y2 204 aaKnown RBP12.34□□□□□ -0.43
CCNE1-204ENST00000574121 TEX38Q6PEX7 206 aa12.34□□□□□ -0.43
CCNE1-204ENST00000574121 LGI3Q8N145 548 aa12.34□□□□□ -0.43
CCNE1-204ENST00000574121 SRSF8Q9BRL6 282 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms