RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 CHPT1Q8WUD6 406 aa10.75□□□□□ -0.69
NDE1-209ENST00000574109 TMEM140Q9NV12 185 aa10.75□□□□□ -0.69
NDE1-209ENST00000574109 SRRM4A7MD48 611 aaKnown RBP10.74□□□□□ -0.69
NDE1-209ENST00000574109 CA2P00918 260 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 IGF1P05019 195 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 MECP2P51608 486 aaKnown RBP10.74□□□□□ -0.69
NDE1-209ENST00000574109 RAB25P57735 213 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
NDE1-209ENST00000574109 BLCAPP62952 87 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 PRSS8Q16651 343 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 ZNF695Q8IW36 515 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 LGI3Q8N145 548 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 DUSP18Q8NEJ0 188 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 LINC01006Q8NI28 216 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 RNASE11Q8TAA1 199 aaKnown RBP10.74□□□□□ -0.69
NDE1-209ENST00000574109 GLYATL2Q8WU03 294 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 ARPC1AQ92747 370 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 RRNAD1Q96FB5 475 aaKnown RBP10.74□□□□□ -0.69
NDE1-209ENST00000574109 SEC22AQ96IW7 307 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 RITA1Q96K30 269 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 TMEM68Q96MH6 324 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 TMEM56Q96MV1 263 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 OR51J1Q9H342 316 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 FKBP11Q9NYL4 201 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 RNF114Q9Y508 228 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 TMEM56-RWDD3S4R434 201 aa10.74□□□□□ -0.69
NDE1-209ENST00000574109 IGHV7-81A0A0B4J1V7 117 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 A0A0B4J2A0 478 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 PRAF2O60831 178 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 SNAPC5O75971 98 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 SFT2D2O95562 160 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 KRASP01116 189 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 OR4E1P0C645 316 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 VDAC1P21796 283 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 SUPT4H1P63272 117 aaKnown RBP10.73□□□□□ -0.69
NDE1-209ENST00000574109 SLC35B1P78383 322 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 SRSF2Q01130 221 aaKnown RBP10.73□□□□□ -0.69
NDE1-209ENST00000574109 TMEM267Q0VDI3 215 aaPredicted RBP10.73□□□□□ -0.69
NDE1-209ENST00000574109 PPP1R1AQ13522 171 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 TMEM187Q14656 261 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 C4orf46Q504U0 113 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 H2BFWTQ7Z2G1 175 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 LYG2Q86SG7 212 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 MRPL41Q8IXM3 137 aaKnown RBP10.73□□□□□ -0.69
NDE1-209ENST00000574109 COMMD1Q8N668 190 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 LRTM2Q8N967 370 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 COQ8AQ8NI60 647 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 SPIN2AQ99865 258 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 SPIN2BQ9BPZ2 258 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 ZNF430Q9H8G1 570 aaPredicted RBP10.73□□□□□ -0.69
NDE1-209ENST00000574109 TPSG1Q9NRR2 321 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 SHPKQ9UHJ6 478 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 PRNDQ9UKY0 176 aa10.73□□□□□ -0.69
NDE1-209ENST00000574109 FBN1P35555 2871 aaKnown RBP10.72□□□□□ -0.69
NDE1-209ENST00000574109 TET2Q6N021 2002 aaPredicted RBP10.72□□□□□ -0.69
NDE1-209ENST00000574109 CNIH1O95406 144 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 DUS4LO95620 317 aaKnown RBP10.72□□□□□ -0.69
NDE1-209ENST00000574109 H2AFB2P0C5Z0 115 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 HLA-GP17693 338 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 G6PCP35575 357 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 CX3CL1P78423 397 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 DHRS2Q13268 280 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 AWAT1Q58HT5 328 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 TMEM268Q5VZI3 342 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 SSX9Q7RTT3 188 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 HSD17B13Q7Z5P4 300 aaPredicted RBP10.72□□□□□ -0.69
NDE1-209ENST00000574109 NRARPQ7Z6K4 114 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 VKORC1L1Q8N0U8 176 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 OR5B3Q8NH48 314 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 SGMS2Q8NHU3 365 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 LSM10Q969L4 123 aaKnown RBP10.72□□□□□ -0.69
NDE1-209ENST00000574109 HSPB9Q9BQS6 159 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 SRSF8Q9BRL6 282 aaKnown RBP10.72□□□□□ -0.69
NDE1-209ENST00000574109 PARP11Q9NR21 331 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 SERTAD4Q9NUC0 356 aa10.72□□□□□ -0.69
NDE1-209ENST00000574109 TRAV6A0A075B6T7 132 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 C9orf170A2RU37 121 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 C15orf61A6NNL5 157 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 UPK2O00526 184 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 ATP6V0E1O15342 81 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 IGKV1-39P01597 117 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 IGKV1D-39P04432 117 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 IL6RP08887 468 aaPredicted RBP10.71□□□□□ -0.69
NDE1-209ENST00000574109 MDKP21741 143 aaPredicted RBP10.71□□□□□ -0.69
NDE1-209ENST00000574109 PROK1P58294 105 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 FXYD3Q14802 87 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 TNXAQ16473 311 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 SP6Q3SY56 376 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 STPG2Q8N412 459 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 ABHD5Q8WTS1 349 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 SRSF12Q8WXF0 261 aaKnown RBP10.71□□□□□ -0.69
NDE1-209ENST00000574109 PHB2Q99623 299 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 COMMD5Q9GZQ3 224 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 WNT10AQ9GZT5 417 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 GPN1Q9HCN4 374 aaPredicted RBP10.71□□□□□ -0.69
NDE1-209ENST00000574109 FLVCR2Q9UPI3 526 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 FOXA2Q9Y261 457 aaPredicted RBP10.71□□□□□ -0.69
NDE1-209ENST00000574109 ZNF257Q9Y2Q1 563 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 TMED3Q9Y3Q3 217 aa10.71□□□□□ -0.69
NDE1-209ENST00000574109 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms