RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ZNF355PQ9NSJ1 428 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 ANXA10Q9UJ72 324 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 SPATA2Q9UM82 520 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 MSGN1A6NI15 193 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 LINC01619G3V211 115 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 OVOL1O14753 267 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 FCGR3BO75015 233 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 CRYZL1O95825 349 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 IGHV3-11P01762 117 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 TRGV3P03979 118 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 HSPB1P04792 205 aaKnown RBP5.74□□□□□ -1.49
NUP88-205ENST00000572809 LGALS1P09382 135 aaKnown RBP5.74□□□□□ -1.49
NUP88-205ENST00000572809 TGFBR1P36897 503 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 INSL3P51460 131 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 TPPP2P59282 170 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 ARPC4P59998 168 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 UBE2KP61086 200 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 LSM3P62310 102 aaKnown RBP5.74□□□□□ -1.49
NUP88-205ENST00000572809 SSBP2P81877 361 aaPredicted RBP5.74□□□□□ -1.49
NUP88-205ENST00000572809 VMA21Q3ZAQ7 101 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 ASPHD1Q5U4P2 390 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 HOGA1Q86XE5 327 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 GVQW1Q8N7I0 195 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 BEST4Q8NFU0 473 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 OSR1Q8TAX0 266 aaPredicted RBP5.74□□□□□ -1.49
NUP88-205ENST00000572809 DLX4Q92988 240 aaPredicted RBP5.74□□□□□ -1.49
NUP88-205ENST00000572809 SLC25A38Q96DW6 304 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 YIPF6Q96EC8 236 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 AUNIPQ9H7T9 357 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 SLC45A2Q9UMX9 530 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 RBMX2Q9Y388 322 aaKnown RBP5.74□□□□□ -1.49
NUP88-205ENST00000572809 PRELID3BQ9Y3B1 194 aa5.74□□□□□ -1.49
NUP88-205ENST00000572809 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
NUP88-205ENST00000572809 IGHV4OR15-8A0A075B7B6 117 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 A0A087WW49 117 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 IGKV1D-13A0A0B4J2D9 117 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 A0A0G2JLM5 398 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 C13orf42A0A1B0GVH6 325 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 H3BUA1 57 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 XRCC3O43542 346 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 IGLV2-14P01704 120 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 IGKV1-13P0DP09 117 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 FCGR2CP31995 323 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 CBX5P45973 191 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 UCP3P55916 312 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 RPL30P62888 115 aaKnown RBP5.73□□□□□ -1.49
NUP88-205ENST00000572809 DCTN2Q13561 401 aaKnown RBP5.73□□□□□ -1.49
NUP88-205ENST00000572809 TNXAQ16473 311 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 PRSS8Q16651 343 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 MRGPRG-AS1Q2M3A8 158 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 IDO2Q6ZQW0 420 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 KCTD9Q7L273 389 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 ZNF429Q86V71 674 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 POC5Q8NA72 575 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 PHB2Q99623 299 aa5.73□□□□□ -1.49
NUP88-205ENST00000572809 HSD17B10Q99714 261 aaKnown RBP5.73□□□□□ -1.49
NUP88-205ENST00000572809 MRPS7Q9Y2R9 242 aaKnown RBP5.73□□□□□ -1.49
NUP88-205ENST00000572809 A0A087WWL8 130 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 CREBL2O60519 120 aaPredicted RBP5.72□□□□□ -1.49
NUP88-205ENST00000572809 SAP30O75446 220 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 ACTL6BO94805 426 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 BRI3O95415 125 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 FCER2P06734 321 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 APELAP0DMC3 54 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 PTHLHP12272 177 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 AADACP22760 399 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 PMS2P11Q13670 270 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 CDK10Q15131 360 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 OR2B11Q5JQS5 317 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 UBE2NLQ5JXB2 153 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 ZNF66Q6ZN08 573 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 MMD2Q8IY49 270 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 SAMD12Q8N8I0 201 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 OR5AP2Q8NGF4 316 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 SECTM1Q8WVN6 248 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 TCTEX1D2Q8WW35 142 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 GIMAP1Q8WWP7 306 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 ACOT12Q8WYK0 555 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 TINAGL1Q9GZM7 467 aaPredicted RBP5.72□□□□□ -1.49
NUP88-205ENST00000572809 ZNF430Q9H8G1 570 aaPredicted RBP5.72□□□□□ -1.49
NUP88-205ENST00000572809 RANGRFQ9HD47 186 aaPredicted RBP5.72□□□□□ -1.49
NUP88-205ENST00000572809 CCL28Q9NRJ3 127 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 COA4Q9NYJ1 87 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 TAS2R8Q9NYW2 309 aa5.72□□□□□ -1.49
NUP88-205ENST00000572809 ZNF256Q9Y2P7 627 aaPredicted RBP5.72□□□□□ -1.49
NUP88-205ENST00000572809 LSM4Q9Y4Z0 139 aaKnown RBP5.72□□□□□ -1.49
NUP88-205ENST00000572809 SMIM31A0A1B0GVY4 71 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 MEIS3P1A6NDR6 274 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 TRIM64CA6NLI5 447 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 M0QYG6 137 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 MPPED1O15442 326 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 TNFSF12O43508 249 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 OR2A4O95047 310 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 HRASP01112 189 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 PPYP01298 95 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 OR9G9P0C7N8 305 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 SAA1P0DJI8 122 aaPredicted RBP5.71□□□□□ -1.5
NUP88-205ENST00000572809 PRSS3P35030 304 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 BRWD1-AS2P59051 145 aa5.71□□□□□ -1.5
NUP88-205ENST00000572809 EIF4EBP1Q13541 118 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms