RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 OR56B1Q8NGI3 324 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 MRPS24Q96EL2 167 aaKnown RBP5.19□□□□□ -1.58
CHD3-213ENST00000571249 ZNF488Q96MN9 340 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 NRIP2Q9BQI9 281 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 SLC25A21Q9BQT8 299 aaPredicted RBP5.19□□□□□ -1.58
CHD3-213ENST00000571249 TMEM59Q9BXS4 323 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 C20orf85Q9H1P6 137 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 SRD5A3Q9H8P0 318 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 RASL12Q9NYN1 266 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 OR14J1Q9UGF5 321 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 APLNQ9ULZ1 77 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 WSB1Q9Y6I7 421 aa5.19□□□□□ -1.58
CHD3-213ENST00000571249 IGKV1-27A0A075B6S5 117 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 MEIKINA0A087WXM9 373 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 hADV38S2A0JD32 116 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 FAM90A10PA6NDY2 464 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 TMEM235A6NFC5 223 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 OOSP1A8MZH6 123 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 ZNF736B4DX44 427 aaPredicted RBP5.18□□□□□ -1.58
CHD3-213ENST00000571249 DIRC3C9JPN6 131 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 K7N7A8 449 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 TOR1AO14656 332 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 SSX5O60225 188 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 SCAF4O95104 1147 aaKnown RBP5.18□□□□□ -1.58
CHD3-213ENST00000571249 RAB3DO95716 219 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 CYB5AP00167 134 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 NRASP01111 189 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 IGKV1D-33P01593 117 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 IGKV1-33P01594 117 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 CD3DP04234 171 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 GTF2F2P13984 249 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 MGMTP16455 207 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 ERP29P30040 261 aaKnown RBP5.18□□□□□ -1.58
CHD3-213ENST00000571249 CBX5P45973 191 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 RBP2P50120 134 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 GPM6AP51674 278 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 FUT6P51993 359 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 ATP1B3P54709 279 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 CD81P60033 236 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 MEF2CQ06413 473 aaPredicted RBP5.18□□□□□ -1.58
CHD3-213ENST00000571249 RBM39Q14498 530 aaKnown RBP5.18□□□□□ -1.58
CHD3-213ENST00000571249 CDK10Q15131 360 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 FCN2Q15485 313 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 HLA-DRB5Q30154 266 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 SMIM21Q3B7S5 101 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 ACTBL2Q562R1 376 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 PLAC9Q5JTB6 97 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
CHD3-213ENST00000571249 ELP2Q6IA86 826 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 NOXA1Q86UR1 476 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 TGIF2LXQ8IUE1 241 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 SAXO1Q8IYX7 474 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 CSNK2A3Q8NEV1 391 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 OR4D10Q8NGI6 311 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 TNFAIP8L1Q8WVP5 186 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 GIMAP1Q8WWP7 306 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 HPSE2Q8WWQ2 592 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 RAB3CQ96E17 227 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 ZNF486Q96H40 463 aaPredicted RBP5.18□□□□□ -1.58
CHD3-213ENST00000571249 SPACA5Q96QH8 159 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 NEU1Q99519 415 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 GPER1Q99527 375 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 NICN1Q9BSH3 213 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 SELENOIQ9C0D9 397 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 TOLLIPQ9H0E2 274 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 WFDC10AQ9H1F0 79 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 MED28Q9H204 178 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 OR51I2Q9H344 312 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 GPR173Q9NS66 373 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 MPC1Q9Y5U8 109 aa5.18□□□□□ -1.58
CHD3-213ENST00000571249 PQLC2LA1A4F0 135 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 IZUMO1RA6ND01 250 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 ARPC1BO15143 372 aaKnown RBP5.17□□□□□ -1.58
CHD3-213ENST00000571249 SOCS1O15524 211 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 OR2A4O95047 310 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 RAB9AP51151 201 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 MTCP1P56278 107 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 PDZK1IP1Q13113 114 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 EDDM3AQ14507 147 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 MRGPRG-AS1Q2M3A8 158 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 ZFP69Q49AA0 526 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 NHLRC3Q5JS37 347 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 PRAMEF5Q5TYX0 476 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 HOGA1Q86XE5 327 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 BATF2Q8N1L9 274 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 ARRDC1Q8N5I2 433 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 TPRX1Q8N7U7 411 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 ASCC1Q8N9N2 400 aaKnown RBP5.17□□□□□ -1.58
CHD3-213ENST00000571249 OR11H7Q8NGC8 314 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 OR51S1Q8NGJ8 323 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 ASB13Q8WXK3 278 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 PIGCQ92535 297 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 TOMM40LQ969M1 308 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 RPEQ96AT9 228 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 BORCS8Q96FH0 119 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 HYLS1Q96M11 299 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 OR2A7Q96R45 310 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 PRRT1Q99946 306 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 HSPB9Q9BQS6 159 aa5.17□□□□□ -1.58
CHD3-213ENST00000571249 PECRQ9BY49 303 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms