RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PRNDQ9UKY0 176 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 MMP24Q9Y5R2 645 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 POMT1Q9Y6A1 747 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM56-RWDD3S4R434 201 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 MALRD1Q5VYJ5 2156 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 CCDC168Q8NDH2 2452 aa5.28□□□□□ -1.56
CTDNEP1-204ENST00000570484 ARID1AO14497 2285 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 DNAJC9-AS1A6NH13 148 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 FAM90A9PA6NNJ1 464 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 CYSRT1A8MQ03 144 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 WRBO00258 174 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 RRHO14718 337 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 ADAP1O75689 374 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 KBTBD11O94819 623 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 CNIH1O95406 144 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 SCGB1D2O95969 90 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 FAM157CP0CG43 387 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 PET100P0DJ07 73 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 IER3P46695 156 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 HOXA1P49639 335 aaPredicted RBP5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR2B8PP59922 312 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 GNB1P62873 340 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 RPL8P62917 257 aaKnown RBP5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 SMCO1Q147U7 214 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 TNXAQ16473 311 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 IAH1Q2TAA2 248 aaPredicted RBP5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZNF585BQ52M93 769 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 C9orf152Q5JTZ5 239 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 GGNBP1Q5YKI7 109 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR4A47Q6IF82 309 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 Q6YL49 198 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 Q6ZNX1 250 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 LYZL2Q7Z4W2 148 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 MMD2Q8IY49 270 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 SELENOHQ8IZQ5 122 aaKnown RBP5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 TMEM86BQ8N661 226 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 LRTM2Q8N967 370 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 TEX45Q8NA69 505 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR5M8Q8NGP6 311 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 LHFPL5Q8TAF8 219 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 LSM10Q969L4 123 aaKnown RBP5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 SEC22AQ96IW7 307 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 COMMD5Q9GZQ3 224 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 NPFFR1Q9GZQ6 430 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 FBXL15Q9H469 300 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 RANBP3Q9H6Z4 567 aaPredicted RBP5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 ENY2Q9NPA8 101 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 BET1LQ9NYM9 111 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 CACNG5Q9UF02 275 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 SOX21Q9Y651 276 aaPredicted RBP5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 CSMD1Q96PZ7 3565 aa5.27□□□□□ -1.57
CTDNEP1-204ENST00000570484 A0A1B0GU03 582 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 C15orf61A6NNL5 157 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 CEBPZOSA8MTT3 80 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 FGF16O43320 207 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 CRLF1O75462 422 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 NDUFA3O95167 84 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 CA2P00918 260 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 IFNA17P01571 189 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 IGKV1-39P01597 117 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 IGKV1-5P01602 117 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 IGKV1D-39P04432 117 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 CRYBA1P05813 215 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 FGF2P09038 288 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 TRAPPC2P0DI81 140 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 TRAPPC2BP0DI82 140 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 SLC25A6P12236 298 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 CNTFRP26992 372 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 BRWD1-AS2P59051 145 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 S100A10P60903 97 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 CYCSP99999 105 aaKnown RBP5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 EBI3Q14213 229 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 PSG5Q15238 335 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 FCN2Q15485 313 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 POU2AF1Q16633 256 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 C5orf64Q2M2E5 130 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 AKAP14Q86UN6 197 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 PPP1R27Q86WC6 154 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 FOXRED2Q8IWF2 684 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 Q8N6K4 173 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 NPBQ8NG41 125 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 ASB13Q8WXK3 278 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 AJUBAQ96IF1 538 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZNF48Q96MX3 618 aaPredicted RBP5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 RBM14Q96PK6 669 aaKnown RBP5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 DUX5Q96PT3 197 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 HINT2Q9BX68 163 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 CHIAQ9BZP6 476 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZFP57Q9NU63 452 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 FKBP11Q9NYL4 201 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 GSKIPQ9P0R6 139 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 ABCA2Q9BZC7 2435 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 CR1P17927 2039 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 ITPR3Q14573 2671 aa5.26□□□□□ -1.57
CTDNEP1-204ENST00000570484 NOTCH2Q04721 2471 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 OTOGQ6ZRI0 2925 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 FLNBO75369 2602 aaKnown RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 NBPF19A0A087WUL8 3843 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 A0A0G2JRQ6 117 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms