RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 FOXRED2Q8IWF2 684 aa13.22□□□□□ -0.29
COMMD4-224ENST00000568877 OR4A5Q8NH83 315 aa13.22□□□□□ -0.29
COMMD4-224ENST00000568877 C20orf85Q9H1P6 137 aa13.22□□□□□ -0.29
COMMD4-224ENST00000568877 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-224ENST00000568877 TMEM140Q9NV12 185 aa13.22□□□□□ -0.29
COMMD4-224ENST00000568877 BET1LQ9NYM9 111 aa13.22□□□□□ -0.29
COMMD4-224ENST00000568877 AP4M1O00189 453 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 CDS2O95674 445 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 IL6RP08887 468 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-224ENST00000568877 ANXA3P12429 323 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 UBE2MP61081 183 aaKnown RBP13.21□□□□□ -0.29
COMMD4-224ENST00000568877 GNB1P62873 340 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 TMEM187Q14656 261 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 MMD2Q8IY49 270 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 CADM3Q8N126 398 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 ENKURQ8TC29 256 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 SEC22AQ96IW7 307 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 WNT10AQ9GZT5 417 aa13.21□□□□□ -0.29
COMMD4-224ENST00000568877 TRAV6A0A075B6T7 132 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 HAX1O00165 279 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 UPK2O00526 184 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 ATP6V0E1O15342 81 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 ATG12O94817 140 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 CNIH1O95406 144 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 IGF1P05019 195 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 VAMP1P23763 118 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 SSBP2P81877 361 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-224ENST00000568877 NDPQ00604 133 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 PPP1R1AQ13522 171 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 FXYD3Q14802 87 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 LHFPL5Q8TAF8 219 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 TMEM56Q96MV1 263 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 NOL4LQ96MY1 436 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-224ENST00000568877 PARP11Q9NR21 331 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 NUDT15Q9NV35 164 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 LINC00527Q9UJ94 153 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 TMEM56-RWDD3S4R434 201 aa13.2□□□□□ -0.3
COMMD4-224ENST00000568877 ACTL6BO94805 426 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 SFT2D2O95562 160 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 ANXA7P20073 488 aaKnown RBP13.19□□□□□ -0.3
COMMD4-224ENST00000568877 MAS1LP35410 378 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 RPL8P62917 257 aaKnown RBP13.19□□□□□ -0.3
COMMD4-224ENST00000568877 TNXAQ16473 311 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 C12orf54Q6X4T0 127 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 H2BFWTQ7Z2G1 175 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 NRARPQ7Z6K4 114 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 CENPVQ7Z7K6 275 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-224ENST00000568877 ZNF695Q8IW36 515 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 SELENOHQ8IZQ5 122 aaKnown RBP13.19□□□□□ -0.3
COMMD4-224ENST00000568877 STPG2Q8N412 459 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 KLHDC1Q8N7A1 406 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 DUSP18Q8NEJ0 188 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 ABHD5Q8WTS1 349 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 CHPT1Q8WUD6 406 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 ARPC1AQ92747 370 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 PALMDQ9NP74 551 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 PRR13Q9NZ81 148 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 ZNF580Q9UK33 172 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 FBXO7Q9Y3I1 522 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 NUBP2Q9Y5Y2 271 aa13.19□□□□□ -0.3
COMMD4-224ENST00000568877 TRAV3A0A0B4J244 114 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 IGKV1-5P01602 117 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 H2AFB2P0C5Z0 115 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 OR4E1P0C645 316 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 OR9G9P0C7N8 305 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-224ENST00000568877 HLA-GP17693 338 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 AKR1C2P52895 323 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 SRPXP78539 464 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 TMEM268Q5VZI3 342 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 LGI3Q8N145 548 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 SGMS2Q8NHU3 365 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 GRPEL2Q8TAA5 225 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 RBPMSQ93062 196 aaKnown RBP13.18□□□□□ -0.3
COMMD4-224ENST00000568877 IL22RA2Q969J5 263 aa13.18□□□□□ -0.3
COMMD4-224ENST00000568877 FAM103A1Q9BTL3 118 aaKnown RBP13.18□□□□□ -0.3
COMMD4-224ENST00000568877 ALX4Q9H161 411 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-224ENST00000568877 C9orf170A2RU37 121 aa13.17□□□□□ -0.3
COMMD4-224ENST00000568877 SNAPC5O75971 98 aa13.17□□□□□ -0.3
COMMD4-224ENST00000568877 HLA-AP01891 365 aaKnown RBP13.17□□□□□ -0.3
COMMD4-224ENST00000568877 FGF2P09038 288 aa13.17□□□□□ -0.3
COMMD4-224ENST00000568877 VDAC1P21796 283 aa13.17□□□□□ -0.3
COMMD4-224ENST00000568877 MECP2P51608 486 aaKnown RBP13.17□□□□□ -0.3
COMMD4-224ENST00000568877 CRIP2P52943 208 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-224ENST00000568877 C4orf46Q504U0 113 aa13.17□□□□□ -0.3
COMMD4-224ENST00000568877 WIPF2Q8TF74 440 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-224ENST00000568877 CASTOR1Q8WTX7 329 aa13.17□□□□□ -0.3
COMMD4-224ENST00000568877 WFDC12Q8WWY7 111 aa13.17□□□□□ -0.3
COMMD4-224ENST00000568877 SRSF12Q8WXF0 261 aaKnown RBP13.17□□□□□ -0.3
COMMD4-224ENST00000568877 RRNAD1Q96FB5 475 aaKnown RBP13.17□□□□□ -0.3
COMMD4-224ENST00000568877 GON7Q9BXV9 100 aa13.17□□□□□ -0.3
COMMD4-224ENST00000568877 WSB1Q9Y6I7 421 aa13.17□□□□□ -0.3
COMMD4-224ENST00000568877 TRAV41A0A0B4J266 112 aa13.16□□□□□ -0.3
COMMD4-224ENST00000568877 PIGBOS1A0A0B4J2F0 54 aa13.16□□□□□ -0.3
COMMD4-224ENST00000568877 PSMB11A5LHX3 300 aa13.16□□□□□ -0.3
COMMD4-224ENST00000568877 G3V318 75 aa13.16□□□□□ -0.3
COMMD4-224ENST00000568877 P0C879 139 aa13.16□□□□□ -0.3
COMMD4-224ENST00000568877 SLC35B1P78383 322 aa13.16□□□□□ -0.3
COMMD4-224ENST00000568877 TMEM267Q0VDI3 215 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-224ENST00000568877 DHRS2Q13268 280 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms