RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 OR2G3Q8NGZ4 309 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 LRRC20Q8TCA0 184 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 SCGB1C1Q8TD33 95 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 RPEQ96AT9 228 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 TSNAXQ99598 290 aaKnown RBP5.74□□□□□ -1.49
SMG1-215ENST00000568239 NABP2Q9BQ15 211 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 HIPK2Q9H2X6 1198 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 ENY2Q9NPA8 101 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 INSIG2Q9Y5U4 225 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 PTPN13Q12923 2485 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 AGPAT2O15120 278 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 IGHV4-39P01824 125 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 ARG1P05089 322 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 SAA1P0DJI8 122 aaPredicted RBP5.74□□□□□ -1.49
SMG1-215ENST00000568239 ZFP36P26651 326 aaKnown RBP5.74□□□□□ -1.49
SMG1-215ENST00000568239 FHITP49789 147 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 SPCS3P61009 180 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 KLRD1Q13241 179 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 PXDC1Q5TGL8 231 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 Q6ZRG5 221 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 C1orf122Q6ZSJ8 110 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 THNSL2Q86YJ6 484 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 LINC00311Q8N616 119 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 OR10P1Q8NGE3 313 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 OR4C13Q8NGP0 309 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 NRGNQ92686 78 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 NARS2Q96I59 477 aaKnown RBP5.74□□□□□ -1.49
SMG1-215ENST00000568239 OR4C12Q96R67 309 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 GINS3Q9BRX5 216 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 DOPEY2Q9Y3R5 2298 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 UBE2L5PA0A1B0GUS4 154 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 C15orf61A6NNL5 157 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 BUB1B-PAK6H3BSN5 160 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 SEC11BP0C7V7 166 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 SPP1P10451 314 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 PAX6P26367 422 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 CAMLGP49069 296 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 SULT1A2P50226 295 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 ATP5J2P56134 94 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 TLE4Q04727 773 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 AKR1C1Q04828 323 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 SLC38A11Q08AI6 406 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 TOR2AQ5JU69 321 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 HAPLN4Q86UW8 402 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 C8orf46Q8TAG6 207 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 OSR1Q8TAX0 266 aaPredicted RBP5.73□□□□□ -1.49
SMG1-215ENST00000568239 ZNF596Q8TC21 504 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 ST6GALNAC6Q969X2 333 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 PCGF1Q9BSM1 259 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 PLA2G2EQ9NZK7 142 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 TCF19Q9Y242 345 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 WASHC3Q9Y3C0 194 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 FBXO7Q9Y3I1 522 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 OR51B2Q9Y5P1 312 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 KLF2Q9Y5W3 355 aaPredicted RBP5.73□□□□□ -1.49
SMG1-215ENST00000568239 CSMD1Q96PZ7 3565 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 ABCA12Q86UK0 2595 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 ABCA1O95477 2261 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 FAM90A9PA6NNJ1 464 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 OVOL3O00110 214 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 FGF16O43320 207 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 IGLV1-47P01700 117 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 COX6B1P14854 86 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 PDLIM4P50479 330 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 RAB13P51153 203 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 TMEM14EPQ6UXP3 125 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 Q8N7P7 452 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 C8orf31Q8N9H6 132 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 LY6G5BQ8NDX9 201 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 FAM213BQ8TBF2 198 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 TNFRSF14Q92956 283 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 PERPQ96FX8 193 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 AIFM2Q9BRQ8 373 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 RSG1Q9BU20 258 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 MS4A7Q9GZW8 240 aaPredicted RBP5.73□□□□□ -1.49
SMG1-215ENST00000568239 BARX1Q9HBU1 254 aaPredicted RBP5.73□□□□□ -1.49
SMG1-215ENST00000568239 HILPDAQ9Y5L2 63 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 ANKRD17O75179 2603 aaKnown RBP5.73□□□□□ -1.49
SMG1-215ENST00000568239 USP9YO00507 2555 aaPredicted RBP5.73□□□□□ -1.49
SMG1-215ENST00000568239 NAV3Q8IVL0 2385 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 SMCO3A2RU48 225 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 MFSD2BA6NFX1 497 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 SLC25A17O43808 307 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 IGHV2-5P01817 119 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 IFNA4P05014 189 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 OR8U8P0C7N1 319 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 HSPE1P61604 102 aaKnown RBP5.73□□□□□ -1.49
SMG1-215ENST00000568239 SRSF1Q07955 248 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMG1-215ENST00000568239 SP5Q6BEB4 398 aaPredicted RBP5.73□□□□□ -1.49
SMG1-215ENST00000568239 PDPNQ86YL7 162 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 OR4P4Q8NGL7 312 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 CLDND2Q8NHS1 167 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 IGFBPL1Q8WX77 278 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 COMMD5Q9GZQ3 224 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 ARV1Q9H2C2 271 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 MMP26Q9NRE1 261 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 PRNDQ9UKY0 176 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 AUP1Q9Y679 476 aa5.73□□□□□ -1.49
SMG1-215ENST00000568239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.72□□□□□ -1.49
SMG1-215ENST00000568239 UBR5O95071 2799 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms