RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 MAFIPQ8WZ33 124 aa12.64□□□□□ -0.39
TSR3-202ENST00000566296 TMEM68Q96MH6 324 aa12.64□□□□□ -0.39
TSR3-202ENST00000566296 GAR1Q9NY12 217 aaKnown RBP12.64□□□□□ -0.39
TSR3-202ENST00000566296 MTFP1Q9UDX5 166 aa12.64□□□□□ -0.39
TSR3-202ENST00000566296 ANXA10Q9UJ72 324 aa12.64□□□□□ -0.39
TSR3-202ENST00000566296 CTXN2P0C2S0 81 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 GSTT2P0CG29 244 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 GSTT2BP0CG30 244 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 AADACP22760 399 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 ARPC4P59998 168 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 TATDN3Q17R31 274 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 RNASE12Q5GAN4 147 aaKnown RBP12.63□□□□□ -0.39
TSR3-202ENST00000566296 LCN12Q6JVE5 192 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 GDPD1Q8N9F7 314 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 HARBI1Q96MB7 349 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 CABLES2Q9BTV7 478 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 SRRQ9GZT4 340 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 AKIP1Q9NQ31 210 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 RDH8Q9NYR8 311 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 LYSTQ99698 3801 aa12.63□□□□□ -0.39
TSR3-202ENST00000566296 IGKV1D-8A0A087WSZ0 117 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 PROP1O75360 226 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 IFNA6P05013 189 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 LGALS7P47929 136 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 SYNJ2BPP57105 145 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 LINC00205P59089 165 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 Q8N402 240 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 MFSD4AQ8N468 514 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 SNAPC3Q92966 411 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 TUBA4BQ9H853 241 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 TAS2R8Q9NYW2 309 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 KLK11Q9UBX7 282 aa12.62□□□□□ -0.39
TSR3-202ENST00000566296 RBMX2Q9Y388 322 aaKnown RBP12.62□□□□□ -0.39
TSR3-202ENST00000566296 TAS2R46P59540 309 aa12.61□□□□□ -0.39
TSR3-202ENST00000566296 KLF5Q13887 457 aaPredicted RBP12.61□□□□□ -0.39
TSR3-202ENST00000566296 OR5AP2Q8NGF4 316 aa12.61□□□□□ -0.39
TSR3-202ENST00000566296 PHB2Q99623 299 aa12.61□□□□□ -0.39
TSR3-202ENST00000566296 THAP7Q9BT49 309 aaPredicted RBP12.61□□□□□ -0.39
TSR3-202ENST00000566296 WDR12Q9GZL7 423 aaKnown RBP12.61□□□□□ -0.39
TSR3-202ENST00000566296 TINAGL1Q9GZM7 467 aaPredicted RBP12.61□□□□□ -0.39
TSR3-202ENST00000566296 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
TSR3-202ENST00000566296 COA4Q9NYJ1 87 aa12.61□□□□□ -0.39
TSR3-202ENST00000566296 PEF1Q9UBV8 284 aaKnown RBP12.61□□□□□ -0.39
TSR3-202ENST00000566296 EPPK1P58107 5090 aaKnown RBP12.6□□□□□ -0.39
TSR3-202ENST00000566296 TRBV6-7A0A0A0MS04 114 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 IGKV1-6A0A0C4DH72 117 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 BET1O15155 118 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 SHOXO15266 292 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 IGLV2-23P01705 113 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 FCER2P06734 321 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 TBPP20226 339 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 DEFA5Q01523 94 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 ZNF846Q147U1 533 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 HAGHQ16775 308 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 RTL8BQ17RB0 113 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 RPEL1Q2QD12 228 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 IGSF11Q5DX21 431 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 BVESQ8NE79 360 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 OR5H2Q8NGV7 314 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 OR10J5Q8NHC4 309 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 USMG5Q96IX5 58 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 GINS4Q9BRT9 223 aa12.6□□□□□ -0.39
TSR3-202ENST00000566296 BRI3O95415 125 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 HLA-DMAP28067 261 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 TAS2R19P59542 299 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 SSBP2P81877 361 aaPredicted RBP12.59□□□□□ -0.39
TSR3-202ENST00000566296 TAGLNQ01995 201 aaKnown RBP12.59□□□□□ -0.39
TSR3-202ENST00000566296 CDK10Q15131 360 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 ZNF343Q6P1L6 599 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 ADAMTSL5Q6ZMM2 481 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 LYSMD2Q8IV50 215 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 TMEM229BQ8NBD8 167 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 SDHAF2Q9NX18 166 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 SIGLEC8Q9NYZ4 499 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 PEMTQ9UBM1 199 aa12.59□□□□□ -0.39
TSR3-202ENST00000566296 MPPED1O15442 326 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 OR2A4O95047 310 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 CRYGBP07316 175 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 RRASP10301 218 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 PPP5CP53041 499 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 PJVKQ0ZLH3 352 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 DYRK1AQ13627 763 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 VMA21Q3ZAQ7 101 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 TRIQKQ629K1 86 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 IL34Q6ZMJ4 242 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 TRIM63Q969Q1 353 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 CCDC32Q9BV29 185 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 RBM7Q9Y580 266 aaKnown RBP12.58□□□□□ -0.4
TSR3-202ENST00000566296 CSMD3Q7Z407 3707 aa12.58□□□□□ -0.4
TSR3-202ENST00000566296 ANKRD20A5PA0PJZ0 165 aa12.57□□□□□ -0.4
TSR3-202ENST00000566296 JTBO76095 146 aa12.57□□□□□ -0.4
TSR3-202ENST00000566296 TRBV12-3P01733 135 aa12.57□□□□□ -0.4
TSR3-202ENST00000566296 PMP2P02689 132 aa12.57□□□□□ -0.4
TSR3-202ENST00000566296 CSN3P07498 182 aa12.57□□□□□ -0.4
TSR3-202ENST00000566296 APELAP0DMC3 54 aa12.57□□□□□ -0.4
TSR3-202ENST00000566296 HRH1P35367 487 aa12.57□□□□□ -0.4
TSR3-202ENST00000566296 AP3S2P59780 193 aa12.57□□□□□ -0.4
TSR3-202ENST00000566296 TMEM177Q53S58 311 aa12.57□□□□□ -0.4
TSR3-202ENST00000566296 RNASE10Q5GAN6 216 aaKnown RBP12.57□□□□□ -0.4
TSR3-202ENST00000566296 H1FOOQ8IZA3 346 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms