RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 TMEM187Q14656 261 aa13.14□□□□□ -0.31
RNF40-207ENST00000565931 TRIM16LQ309B1 348 aa13.14□□□□□ -0.31
RNF40-207ENST00000565931 OR4A47Q6IF82 309 aa13.14□□□□□ -0.31
RNF40-207ENST00000565931 DMBX1Q8NFW5 382 aa13.14□□□□□ -0.31
RNF40-207ENST00000565931 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
RNF40-207ENST00000565931 ZNF430Q9H8G1 570 aaPredicted RBP13.14□□□□□ -0.31
RNF40-207ENST00000565931 TMEM140Q9NV12 185 aa13.14□□□□□ -0.31
RNF40-207ENST00000565931 MARCH11A6NNE9 402 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 UPK2O00526 184 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 DEFA1P59665 94 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 DEFA3P59666 94 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 UBE2MP61081 183 aaKnown RBP13.13□□□□□ -0.31
RNF40-207ENST00000565931 PPP1R1AQ13522 171 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 FOXRED2Q8IWF2 684 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 MMD2Q8IY49 270 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 OR4A5Q8NH83 315 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 TMEM56Q96MV1 263 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 C20orf85Q9H1P6 137 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 LINC00527Q9UJ94 153 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
RNF40-207ENST00000565931 TRAV3A0A0B4J244 114 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 HAX1O00165 279 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 AP4M1O00189 453 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 ATP6V0E1O15342 81 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 CREBL2O60519 120 aaPredicted RBP13.12□□□□□ -0.31
RNF40-207ENST00000565931 SFT2D2O95562 160 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 IGF1P05019 195 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 EGR2P11161 476 aaPredicted RBP13.12□□□□□ -0.31
RNF40-207ENST00000565931 ANXA7P20073 488 aaKnown RBP13.12□□□□□ -0.31
RNF40-207ENST00000565931 FXYD3Q14802 87 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 DUSP18Q8NEJ0 188 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 NOL4LQ96MY1 436 aaPredicted RBP13.12□□□□□ -0.31
RNF40-207ENST00000565931 ALX4Q9H161 411 aaPredicted RBP13.12□□□□□ -0.31
RNF40-207ENST00000565931 PARP11Q9NR21 331 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 PRR13Q9NZ81 148 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 ZNF580Q9UK33 172 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 FBXO7Q9Y3I1 522 aa13.12□□□□□ -0.31
RNF40-207ENST00000565931 TRAV6A0A075B6T7 132 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 ATG12O94817 140 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 IGKV1-5P01602 117 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 ANXA3P12429 323 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 VAMP1P23763 118 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 CRIP2P52943 208 aaPredicted RBP13.11□□□□□ -0.31
RNF40-207ENST00000565931 GNB1P62873 340 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 NRARPQ7Z6K4 114 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 SELENOHQ8IZQ5 122 aaKnown RBP13.11□□□□□ -0.31
RNF40-207ENST00000565931 STPG2Q8N412 459 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 KLHDC1Q8N7A1 406 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 ENKURQ8TC29 256 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
RNF40-207ENST00000565931 ARPC1AQ92747 370 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 RBPMSQ93062 196 aaKnown RBP13.11□□□□□ -0.31
RNF40-207ENST00000565931 IL22RA2Q969J5 263 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 PALMDQ9NP74 551 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 NUDT15Q9NV35 164 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 NUBP2Q9Y5Y2 271 aa13.11□□□□□ -0.31
RNF40-207ENST00000565931 ACTL6BO94805 426 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 CNIH1O95406 144 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 H2AFB2P0C5Z0 115 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 OR4E1P0C645 316 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 OR9G9P0C7N8 305 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 P0C879 139 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 MAS1LP35410 378 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 MECP2P51608 486 aaKnown RBP13.1□□□□□ -0.31
RNF40-207ENST00000565931 RPL8P62917 257 aaKnown RBP13.1□□□□□ -0.31
RNF40-207ENST00000565931 TNXAQ16473 311 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 C10orf55Q5SWW7 151 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 TMEM268Q5VZI3 342 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 C12orf54Q6X4T0 127 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 CENPVQ7Z7K6 275 aaPredicted RBP13.1□□□□□ -0.31
RNF40-207ENST00000565931 ZNF695Q8IW36 515 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 LGI3Q8N145 548 aa13.1□□□□□ -0.31
RNF40-207ENST00000565931 FAM103A1Q9BTL3 118 aaKnown RBP13.1□□□□□ -0.31
RNF40-207ENST00000565931 C9orf170A2RU37 121 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 FGF2P09038 288 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 MYOD1P15172 320 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 HLA-GP17693 338 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 AKR1C2P52895 323 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 KRTAP10-3P60369 221 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 SRPXP78539 464 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 ANKRD55Q3KP44 614 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 H2BFWTQ7Z2G1 175 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 SGMS2Q8NHU3 365 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 GRPEL2Q8TAA5 225 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 ABHD5Q8WTS1 349 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 CASTOR1Q8WTX7 329 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 CHPT1Q8WUD6 406 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 WFDC12Q8WWY7 111 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 SRSF12Q8WXF0 261 aaKnown RBP13.09□□□□□ -0.31
RNF40-207ENST00000565931 NSG2Q9Y328 171 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 WSB1Q9Y6I7 421 aa13.09□□□□□ -0.31
RNF40-207ENST00000565931 TRAV41A0A0B4J266 112 aa13.08□□□□□ -0.32
RNF40-207ENST00000565931 A0A0G2JRQ6 117 aa13.08□□□□□ -0.32
RNF40-207ENST00000565931 G3V318 75 aa13.08□□□□□ -0.32
RNF40-207ENST00000565931 SNAPC5O75971 98 aa13.08□□□□□ -0.32
RNF40-207ENST00000565931 CFHR3Q02985 330 aa13.08□□□□□ -0.32
RNF40-207ENST00000565931 DHRS2Q13268 280 aa13.08□□□□□ -0.32
RNF40-207ENST00000565931 IZUMO4Q1ZYL8 232 aa13.08□□□□□ -0.32
RNF40-207ENST00000565931 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms