RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 OR51S1Q8NGJ8 323 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 MARCH1Q8TCQ1 289 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 TRIM63Q969Q1 353 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 RBMXL1Q96E39 390 aaKnown RBP9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 GPHA2Q96T91 129 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 SPIN2AQ99865 258 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 CITED2Q99967 270 aaPredicted RBP9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 SPIN2BQ9BPZ2 258 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 FKBP11Q9NYL4 201 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 PTTG2Q9NZH5 202 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 LINC00527Q9UJ94 153 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 GPR132Q9UNW8 380 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 FOXA2Q9Y261 457 aaPredicted RBP9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 KCNIP3Q9Y2W7 256 aa9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 TET2Q6N021 2002 aaPredicted RBP9.89□□□□□ -0.83
SHCBP1-204ENST00000565887 H0Y980 276 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 H3BUA1 57 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 BRI3O95415 125 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 IGLV1-40P01703 118 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 EGR2P11161 476 aaPredicted RBP9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 CDX1P47902 265 aaPredicted RBP9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 PPP5CP53041 499 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 GNB1P62873 340 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 PJVKQ0ZLH3 352 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 TNXAQ16473 311 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 UNQ5815/PRO19632Q6UWF5 114 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 C11orf44Q8N8P7 122 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 OR13C8Q8NGS7 320 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 R3HDM4Q96D70 268 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 TSC22D3Q99576 134 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 C7orf50Q9BRJ6 194 aaKnown RBP9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 SLA2Q9H6Q3 261 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 ZNF430Q9H8G1 570 aaPredicted RBP9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 HRASLSQ9HDD0 168 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 WSB1Q9Y6I7 421 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 ANK2Q01484 3957 aa9.88□□□□□ -0.83
SHCBP1-204ENST00000565887 TEX13DA0A0J9YY54 714 aaPredicted RBP9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 C3orf85A0A1B0GTC6 90 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 MSGN1A6NI15 193 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 MARCH11A6NNE9 402 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 SNAPC5O75971 98 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 IL6RP08887 468 aaPredicted RBP9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 PSMB8P28062 276 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 RPL8P62917 257 aaKnown RBP9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 DHODHQ02127 395 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 NSUN5P1Q3KNT7 163 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 ZNF585BQ52M93 769 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 TCTEX1D4Q5JR98 221 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 THOC7Q6I9Y2 204 aaKnown RBP9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 OR4A47Q6IF82 309 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 LFNGQ8NES3 379 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 GRPEL2Q8TAA5 225 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 PHB2Q99623 299 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 SRSF8Q9BRL6 282 aaKnown RBP9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 TPSG1Q9NRR2 321 aa9.87□□□□□ -0.83
SHCBP1-204ENST00000565887 PLXNB1O43157 2135 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 G3V318 75 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 UPK2O00526 184 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 ARPC1BO15143 372 aaKnown RBP9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 S1PR2O95136 353 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 KRASP01116 189 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 HLA-GP17693 338 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 RAB9AP51151 201 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 RPL23AP62750 156 aaKnown RBP9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 ECSCRQ19T08 205 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 C19orf54Q5BKX5 351 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 KHDC1LQ5JSQ8 128 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 FAAP20Q6NZ36 180 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 SSX9Q7RTT3 188 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 HSD17B13Q7Z5P4 300 aaPredicted RBP9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 SGPP2Q8IWX5 399 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 VKORC1L1Q8N0U8 176 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 SRSF12Q8WXF0 261 aaKnown RBP9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 UBE2E2Q96LR5 201 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 RTBDNQ9BSG5 229 aaPredicted RBP9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 CCDC32Q9BV29 185 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 COMMD5Q9GZQ3 224 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 CACFD1Q9UGQ2 172 aa9.86□□□□□ -0.83
SHCBP1-204ENST00000565887 A0A0G2JLM5 398 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 A0A1W2PN81 502 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 CYB5BO43169 146 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 DHFRP00374 187 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 PF4V1P10720 104 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 ANXA3P12429 323 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 PI3P19957 117 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 CHRNA7P36544 502 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 RPL27AP46776 148 aaKnown RBP9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 NDPQ00604 133 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 BAK1Q16611 211 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 MRGPRG-AS1Q2M3A8 158 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 C10orf99Q6UWK7 81 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 TREML4Q6UXN2 200 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 H2BFWTQ7Z2G1 175 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 ZNF695Q8IW36 515 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 MRPL41Q8IXM3 137 aaKnown RBP9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 MRGPRFQ96AM1 343 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 WDR12Q9GZL7 423 aaKnown RBP9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 C5orf66Q9H5L9 145 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 AKIP1Q9NQ31 210 aa9.85□□□□□ -0.83
SHCBP1-204ENST00000565887 TMEM140Q9NV12 185 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms