RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CNIH1O95406 144 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 CA2P00918 260 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 IL6RP08887 468 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-221ENST00000561276 H2AFB2P0C5Z0 115 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 VAMP1P23763 118 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 ERVK-16P61578 105 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 CX3CL1P78423 397 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 TMEM187Q14656 261 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 PRSS8Q16651 343 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 TRIM16LQ309B1 348 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 TMEM95Q3KNT9 176 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 DUSP18Q8NEJ0 188 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 TMEM167AQ8TBQ9 72 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 ENKURQ8TC29 256 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 SEC22AQ96IW7 307 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 MDFIQ99750 246 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 C20orf85Q9H1P6 137 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 OR51J1Q9H342 316 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 ZNF430Q9H8G1 570 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-221ENST00000561276 NUDT15Q9NV35 164 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 BET1LQ9NYM9 111 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 LINC00527Q9UJ94 153 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 RNF114Q9Y508 228 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 MMP24Q9Y5R2 645 aa8.12□□□□□ -1.11
LRRC28-221ENST00000561276 TRAV3A0A0B4J244 114 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 A0A1B0GUS0 222 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 UPK2O00526 184 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 KCNAB3O43448 404 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 SFT2D2O95562 160 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 OR4E1P0C645 316 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 ANXA3P12429 323 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 ANXA7P20073 488 aaKnown RBP8.11□□□□□ -1.11
LRRC28-221ENST00000561276 VDAC2P45880 294 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-221ENST00000561276 UBE2MP61081 183 aaKnown RBP8.11□□□□□ -1.11
LRRC28-221ENST00000561276 PPP1R1AQ13522 171 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 FXYD3Q14802 87 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 H2BFWTQ7Z2G1 175 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 CENPVQ7Z7K6 275 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-221ENST00000561276 ZNF695Q8IW36 515 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 FOXRED2Q8IWF2 684 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 MMD2Q8IY49 270 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 SELENOHQ8IZQ5 122 aaKnown RBP8.11□□□□□ -1.11
LRRC28-221ENST00000561276 OR4A5Q8NH83 315 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 LHFPL5Q8TAF8 219 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 TMEM56Q96MV1 263 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 NOL4LQ96MY1 436 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-221ENST00000561276 ALX4Q9H161 411 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-221ENST00000561276 TMEM140Q9NV12 185 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 PRR13Q9NZ81 148 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 NUBP2Q9Y5Y2 271 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 TMEM56-RWDD3S4R434 201 aa8.11□□□□□ -1.11
LRRC28-221ENST00000561276 TET2Q6N021 2002 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-221ENST00000561276 C9orf170A2RU37 121 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 AP4M1O00189 453 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 ATP6V0E1O15342 81 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 ACTL6BO94805 426 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 ATG12O94817 140 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 IGKV1-5P01602 117 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 IGF1P05019 195 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 OR9G9P0C7N8 305 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 EGR2P11161 476 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-221ENST00000561276 MAS1LP35410 378 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 MECP2P51608 486 aaKnown RBP8.1□□□□□ -1.11
LRRC28-221ENST00000561276 RAB25P57735 213 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 PROK1P58294 105 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 GNB1P62873 340 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 RPL8P62917 257 aaKnown RBP8.1□□□□□ -1.11
LRRC28-221ENST00000561276 SSBP2P81877 361 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-221ENST00000561276 DCTN2Q13561 401 aaKnown RBP8.1□□□□□ -1.11
LRRC28-221ENST00000561276 TNXAQ16473 311 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 C4orf46Q504U0 113 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 AWAT1Q58HT5 328 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 TMEM268Q5VZI3 342 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 CADM3Q8N126 398 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 STPG2Q8N412 459 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 CASTOR1Q8WTX7 329 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 RBPMSQ93062 196 aaKnown RBP8.1□□□□□ -1.11
LRRC28-221ENST00000561276 FAM103A1Q9BTL3 118 aaKnown RBP8.1□□□□□ -1.11
LRRC28-221ENST00000561276 PALMDQ9NP74 551 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 PARP11Q9NR21 331 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 FBXO7Q9Y3I1 522 aa8.1□□□□□ -1.11
LRRC28-221ENST00000561276 PLXNB1O43157 2135 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 MSGN1A6NI15 193 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 G3V318 75 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 WIPF1O43516 503 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 CREBL2O60519 120 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-221ENST00000561276 SNAPC5O75971 98 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 HLA-AP01891 365 aaKnown RBP8.09□□□□□ -1.11
LRRC28-221ENST00000561276 COMPP49747 757 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-221ENST00000561276 AKR1C2P52895 323 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 TMEM267Q0VDI3 215 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-221ENST00000561276 DHRS2Q13268 280 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 IZUMO4Q1ZYL8 232 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 ANKRD55Q3KP44 614 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 KRTAP21-3Q3LHN1 58 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 PLET1Q6UQ28 207 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 LYZL2Q7Z4W2 148 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 LYG2Q86SG7 212 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 LGI3Q8N145 548 aa8.09□□□□□ -1.11
LRRC28-221ENST00000561276 LFNGQ8NES3 379 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms