RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 SNAPC5O75971 98 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 IGKV1-39P01597 117 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 IGKV1D-39P04432 117 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 AMY1AP04745 511 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 ANKRD55Q3KP44 614 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 UXS1Q8NBZ7 420 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 OR52B4Q8NGK2 314 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 COQ8AQ8NI60 647 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 TAF15Q92804 592 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMAD6-204ENST00000559931 RBPMSQ93062 196 aaKnown RBP11.39□□□□□ -0.59
SMAD6-204ENST00000559931 TMEM56Q96MV1 263 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 SEC22CQ9BRL7 303 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 MARVELD1Q9BSK0 173 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 TPSG1Q9NRR2 321 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 TMEM140Q9NV12 185 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 TMEM56-RWDD3S4R434 201 aa11.39□□□□□ -0.59
SMAD6-204ENST00000559931 TNCP24821 2201 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 hCG_2014768A0A024R1R8 64 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 RBMXL2O75526 392 aaKnown RBP11.38□□□□□ -0.59
SMAD6-204ENST00000559931 KBTBD11O94819 623 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 DUS4LO95620 317 aaKnown RBP11.38□□□□□ -0.59
SMAD6-204ENST00000559931 CRYGBP07316 175 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 PJVKQ0ZLH3 352 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 TNXAQ16473 311 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 POU2AF1Q16633 256 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 PRSS8Q16651 343 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 MMD2Q8IY49 270 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 PUSL1Q8N0Z8 303 aaKnown RBP11.38□□□□□ -0.59
SMAD6-204ENST00000559931 OR4A16Q8NH70 328 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 OR4A5Q8NH83 315 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 OR2T6Q8NHC8 308 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 LHFPL5Q8TAF8 219 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 SEC22AQ96IW7 307 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 PHB2Q99623 299 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 ZNF430Q9H8G1 570 aaPredicted RBP11.38□□□□□ -0.59
SMAD6-204ENST00000559931 BET1LQ9NYM9 111 aa11.38□□□□□ -0.59
SMAD6-204ENST00000559931 FBN1P35555 2871 aaKnown RBP11.37□□□□□ -0.59
SMAD6-204ENST00000559931 UPK2O00526 184 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 PRAF2O60831 178 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 CA2P00918 260 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 IGKV1-5P01602 117 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 HLA-DRB1P01911 266 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 IL5P05113 134 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 MECP2P51608 486 aaKnown RBP11.37□□□□□ -0.59
SMAD6-204ENST00000559931 RAG2P55895 527 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 FXYD3Q14802 87 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 Q6ZS46 218 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 Q6ZSV7 163 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 LYZL2Q7Z4W2 148 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 SLC35E3Q7Z769 313 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 SLC35G3Q8N808 338 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 ZNF431Q8TF32 576 aaPredicted RBP11.37□□□□□ -0.59
SMAD6-204ENST00000559931 IL22RA2Q969J5 263 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 MMP24Q9Y5R2 645 aa11.37□□□□□ -0.59
SMAD6-204ENST00000559931 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 A0A0B4J2A0 478 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 KCNAB3O43448 404 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 HOXB5P09067 269 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 RPL8P62917 257 aaKnown RBP11.36□□□□□ -0.59
SMAD6-204ENST00000559931 CX3CL1P78423 397 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 IZUMO4Q1ZYL8 232 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 ZNF562Q6V9R5 426 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 FOXRED2Q8IWF2 684 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 C12orf45Q8N5I9 185 aaPredicted RBP11.36□□□□□ -0.59
SMAD6-204ENST00000559931 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.36□□□□□ -0.59
SMAD6-204ENST00000559931 OR4F5Q8NH21 305 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 GRPEL2Q8TAA5 225 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 HSPB9Q9BQS6 159 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 COMMD5Q9GZQ3 224 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 ZNF702PQ9H963 129 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 PARP11Q9NR21 331 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 SHPKQ9UHJ6 478 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 NSG2Q9Y328 171 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 COL6A5A8TX70 2615 aa11.36□□□□□ -0.59
SMAD6-204ENST00000559931 IGHV7-81A0A0B4J1V7 117 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 LINC01548A6NM66 108 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 TSPAN9O75954 239 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 IFNA21P01568 189 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 OPN1MWP04001 364 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 OR9G9P0C7N8 305 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 OPN1MW2P0DN77 364 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 OPN1MW3P0DN78 364 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 HLA-GP17693 338 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 VDAC1P21796 283 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 MAS1LP35410 378 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 VDAC2P45880 294 aaPredicted RBP11.35□□□□□ -0.59
SMAD6-204ENST00000559931 RELBQ01201 579 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 FAM219AQ8IW50 185 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 LRTM2Q8N967 370 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 MITD1Q8WV92 249 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 LSM10Q969L4 123 aaKnown RBP11.35□□□□□ -0.59
SMAD6-204ENST00000559931 GPR146Q96CH1 333 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 FYTTD1Q96QD9 318 aaKnown RBP11.35□□□□□ -0.59
SMAD6-204ENST00000559931 HINT2Q9BX68 163 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 OR51J1Q9H342 316 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 FKBP11Q9NYL4 201 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 PRNDQ9UKY0 176 aa11.35□□□□□ -0.59
SMAD6-204ENST00000559931 DUXBA0A1W2PPF3 345 aa11.34□□□□□ -0.59
SMAD6-204ENST00000559931 NDUFA7O95182 113 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms