RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 KCNK7Q9Y2U2 307 aa5.62□□□□□ -1.51
SPG11-213ENST00000558988 IGKV1D-8A0A087WSZ0 117 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 METTL21EPA6NDL7 271 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 MSGN1A6NI15 193 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 IFITM5A6NNB3 132 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 MARCH11A6NNE9 402 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 DIRC3C9JPN6 131 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 MFNGO00587 321 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 LDLRAD4O15165 306 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 IGLV2-23P01705 113 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 PRH1P02810 166 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 FCER2P06734 321 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 CD37P11049 281 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 HIST1H1DP16402 221 aaKnown RBP5.61□□□□□ -1.51
SPG11-213ENST00000558988 NFYAP23511 347 aaPredicted RBP5.61□□□□□ -1.51
SPG11-213ENST00000558988 LGALS7P47929 136 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 HSPA13P48723 471 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 CRIP2P52943 208 aaPredicted RBP5.61□□□□□ -1.51
SPG11-213ENST00000558988 SYNJ2BPP57105 145 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 PRKDCP78527 4128 aaKnown RBP5.61□□□□□ -1.51
SPG11-213ENST00000558988 VMA21Q3ZAQ7 101 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 Q6ZNX1 250 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.61□□□□□ -1.51
SPG11-213ENST00000558988 NUDCD2Q8WVJ2 157 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 RNF5Q99942 180 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 CABLES2Q9BTV7 478 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 SLA2Q9H6Q3 261 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 NDUFB11Q9NX14 153 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 STUB1Q9UNE7 303 aa5.61□□□□□ -1.51
SPG11-213ENST00000558988 TRBV6-7A0A0A0MS04 114 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 A0A0G2JLM5 398 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 TMEM235A6NFC5 223 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 SRRM4A7MD48 611 aaKnown RBP5.6□□□□□ -1.51
SPG11-213ENST00000558988 J3KRW8 73 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 RAB27BO00194 218 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 FCGR3BO75015 233 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 ACTL6BO94805 426 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 TRBV12-3P01733 135 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 ZP3P21754 424 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 RANBP1P43487 201 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 GNG2P59768 71 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 SSBP2P81877 361 aaPredicted RBP5.6□□□□□ -1.51
SPG11-213ENST00000558988 MXD1Q05195 221 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 RPEL1Q2QD12 228 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 CDNFQ49AH0 187 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 C10orf55Q5SWW7 151 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 ZFAND6Q6FIF0 208 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 NR2C2APQ86WQ0 139 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 SGPP2Q8IWX5 399 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 RAB24Q969Q5 203 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 TINAGL1Q9GZM7 467 aaPredicted RBP5.6□□□□□ -1.51
SPG11-213ENST00000558988 RANGRFQ9HD47 186 aaPredicted RBP5.6□□□□□ -1.51
SPG11-213ENST00000558988 PALMDQ9NP74 551 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 DAPK2Q9UIK4 370 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 SELENOKQ9Y6D0 94 aa5.6□□□□□ -1.51
SPG11-213ENST00000558988 TRAV1-2A0A0B4J238 106 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 LOC100506127A0A0U1RQW1 187 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 TRDV1A0A1B0GX56 115 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 LINC00473A8K010 186 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 IGHV4-30-4P0DP06 118 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 RRASP10301 218 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 DUTP33316 252 aaKnown RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 EXOSC2Q13868 293 aaKnown RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 PRSS8Q16651 343 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 KCTD9Q7L273 389 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 H1FOOQ8IZA3 346 aaPredicted RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 VKORC1L1Q8N0U8 176 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 OR9G4Q8NGQ1 327 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 LGALS14Q8TCE9 139 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 TCTEX1D2Q8WW35 142 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 SRSF12Q8WXF0 261 aaKnown RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 FYTTD1Q96QD9 318 aaKnown RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 NEU1Q99519 415 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 ZNF430Q9H8G1 570 aaPredicted RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 TXNL4BQ9NX01 149 aaKnown RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 GAR1Q9NY12 217 aaKnown RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 TAS2R8Q9NYW2 309 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 PEF1Q9UBV8 284 aaKnown RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 SPATA2Q9UM82 520 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 RRP15Q9Y3B9 282 aaKnown RBP5.59□□□□□ -1.51
SPG11-213ENST00000558988 S4R3C0 116 aa5.59□□□□□ -1.51
SPG11-213ENST00000558988 IGKV1D-13A0A0B4J2D9 117 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 DPPA5A6NC42 116 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 HMX3A6NHT5 357 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 H3BUA1 57 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 TNFSF12O43508 249 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 OR2J3O76001 311 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 IGHV3-23P01764 117 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 CRYGBP07316 175 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 OR9G9P0C7N8 305 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 SAA1P0DJI8 122 aaPredicted RBP5.58□□□□□ -1.52
SPG11-213ENST00000558988 IGKV1-13P0DP09 117 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 PTHLHP12272 177 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 CD36P16671 472 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 ARPC4P59998 168 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 UBE2KP61086 200 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 RHOGP84095 191 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 DYRK1AQ13627 763 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 NEDD8Q15843 81 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 IDNKQ5T6J7 187 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms