RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 ZSWIM8A7E2V4 1837 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 PGLYRP1O75594 196 aaPredicted RBP7.12□□□□□ -1.27
CHD8-213ENST00000557364 ADIPOQQ15848 244 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 LRTM2Q8N967 370 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 PRELID3AQ96N28 172 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 YLPM1P49750 1951 aaKnown RBP7.12□□□□□ -1.27
CHD8-213ENST00000557364 TCF20Q9UGU0 1960 aaKnown RBP7.12□□□□□ -1.27
CHD8-213ENST00000557364 TLNRD1Q9H1K6 362 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 C7orf66A4D0T2 115 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 AP4M1O00189 453 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 NTN3O00634 580 aaPredicted RBP7.12□□□□□ -1.27
CHD8-213ENST00000557364 SPINK4O60575 86 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 SLC25A16P16260 332 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 LCN2P80188 198 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 CLEC12BQ2HXU8 276 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 ATP1A1-AS1Q5TC04 95 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 Q6AWC8 147 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 SIGLEC12Q96PQ1 595 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 RPRMQ9NS64 109 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 TCF19Q9Y242 345 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 RNF114Q9Y508 228 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 NUDT3O95989 172 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 IBA57Q5T440 356 aaKnown RBP7.12□□□□□ -1.27
CHD8-213ENST00000557364 FAM166AQ6J272 317 aa7.12□□□□□ -1.27
CHD8-213ENST00000557364 TRBV5-7A0A0A0MS05 114 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 EFNA4P52798 201 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 SNAI3Q3KNW1 292 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 SPSB4Q96A44 273 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 RAB37Q96AX2 223 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 MSRB2Q9Y3D2 182 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 IGHV3-72A0A0B4J1Y9 119 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 GGCTO75223 188 aaKnown RBP7.11□□□□□ -1.27
CHD8-213ENST00000557364 ASIPP42127 132 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 FAM27E3Q08E93 113 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 JOSD1Q15040 202 aaPredicted RBP7.11□□□□□ -1.27
CHD8-213ENST00000557364 IGSF11Q5DX21 431 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 C21orf62Q9NYP8 219 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 CSN3P07498 182 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 SCTP09683 121 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 PRSS12P56730 875 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 MESP2Q0VG99 397 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 INSL4Q14641 139 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 TBR1Q16650 682 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 BMPERQ8N8U9 685 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 OR13A1Q8NGR1 328 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 KCNS1Q96KK3 526 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 CBY1Q9Y3M2 126 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 OR4C46A6NHA9 309 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 NDUFS8O00217 210 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 RBFOX2O43251 390 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHD8-213ENST00000557364 TCTAP57738 103 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 MEF2BQ02080 365 aaPredicted RBP7.11□□□□□ -1.27
CHD8-213ENST00000557364 ZNF56Q15929 161 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 LRRC75AQ8NAA5 344 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 TNFRSF18Q9Y5U5 241 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 CACNA1HO95180 2353 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 TRAV20A0A0B4J274 112 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 H3BRM9 83 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 TIAF1O95411 115 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 ATP6V0CP27449 155 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 LEPP41159 167 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 MVDP53602 400 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 MFAP2P55001 183 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 SGK494Q96LW2 274 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 SDF2L1Q9HCN8 221 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 B4DSR2 109 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 TAF15Q92804 592 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHD8-213ENST00000557364 KLK13Q9UKR3 277 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 ZNF256Q9Y2P7 627 aaPredicted RBP7.11□□□□□ -1.27
CHD8-213ENST00000557364 IL11P20809 199 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 NANOS3P60323 173 aaKnown RBP7.11□□□□□ -1.27
CHD8-213ENST00000557364 GTF3AQ92664 365 aaKnown RBP7.11□□□□□ -1.27
CHD8-213ENST00000557364 SLC50A1Q9BRV3 221 aa7.11□□□□□ -1.27
CHD8-213ENST00000557364 PCNX1Q96RV3 2341 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 TCRBV4S1A1TA0A5B7 111 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 NBR2O15453 112 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 ZIC3O60481 467 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 IL4P05112 153 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 CDX1P47902 265 aaPredicted RBP7.1□□□□□ -1.27
CHD8-213ENST00000557364 ZGRF1Q86YA3 2104 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 TPRX1Q8N7U7 411 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 NUDT10Q8NFP7 164 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 PGPA6NDG6 321 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 MINOS1Q5TGZ0 78 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 ABLIM2Q6H8Q1 611 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 PSMG3Q9BT73 122 aaPredicted RBP7.1□□□□□ -1.27
CHD8-213ENST00000557364 MINOS1-NBL1R4GNA1 71 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 LINC01549A6NIU2 74 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 IGKV1D-33P01593 117 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 IGKV1-33P01594 117 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 GPX4P36969 197 aaPredicted RBP7.1□□□□□ -1.27
CHD8-213ENST00000557364 NMUP48645 174 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 LHX2P50458 406 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 TMEM88Q6PEY1 159 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 FBXL7Q9UJT9 491 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.1□□□□□ -1.271e-6■■■■□ 23
CHD8-213ENST00000557364 WDR81Q562E7 1941 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 TMEM250H0YL14 139 aa7.1□□□□□ -1.27
CHD8-213ENST00000557364 WNT2P09544 360 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms