RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 MMP24Q9Y5R2 645 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 TMEM56-RWDD3S4R434 201 aa11.31□□□□□ -0.6
CHD8-208ENST00000555301 TRAV6A0A075B6T7 132 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 IGHV7-81A0A0B4J1V7 117 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 AP4M1O00189 453 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 FCN1O00602 326 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 ACTL6BO94805 426 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 SFT2D2O95562 160 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 IGKV1-39P01597 117 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 IGKV1D-39P04432 117 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 FGF2P09038 288 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 H2AFB2P0C5Z0 115 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 OR4E1P0C645 316 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 ANXA7P20073 488 aaKnown RBP11.3□□□□□ -0.6
CHD8-208ENST00000555301 G6PCP35575 357 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 CX3CL1P78423 397 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 PPP1R1AQ13522 171 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 TMEM187Q14656 261 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 C4orf46Q504U0 113 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 PLET1Q6UQ28 207 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 RBPMSQ93062 196 aaKnown RBP11.3□□□□□ -0.6
CHD8-208ENST00000555301 IL22RA2Q969J5 263 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 SEC22AQ96IW7 307 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 HSPB9Q9BQS6 159 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 OR51J1Q9H342 316 aa11.3□□□□□ -0.6
CHD8-208ENST00000555301 CNIH1O95406 144 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 PTTG1O95997 202 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 HLA-AP01891 365 aaKnown RBP11.29□□□□□ -0.6
CHD8-208ENST00000555301 IGF1P05019 195 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
CHD8-208ENST00000555301 MDKP21741 143 aaPredicted RBP11.29□□□□□ -0.6
CHD8-208ENST00000555301 MAS1LP35410 378 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 MECP2P51608 486 aaKnown RBP11.29□□□□□ -0.6
CHD8-208ENST00000555301 AKR1C2P52895 323 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 RPL8P62917 257 aaKnown RBP11.29□□□□□ -0.6
CHD8-208ENST00000555301 KRTAP21-3Q3LHN1 58 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 TMEM268Q5VZI3 342 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 H2BFWTQ7Z2G1 175 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 LGI3Q8N145 548 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 RRNAD1Q96FB5 475 aaKnown RBP11.29□□□□□ -0.6
CHD8-208ENST00000555301 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
CHD8-208ENST00000555301 SERTAD4Q9NUC0 356 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 RNF114Q9Y508 228 aa11.29□□□□□ -0.6
CHD8-208ENST00000555301 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 UPK2O00526 184 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 SNAPC5O75971 98 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 COMPP49747 757 aaPredicted RBP11.28□□□□□ -0.6
CHD8-208ENST00000555301 RAB25P57735 213 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 GNB1P62873 340 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 DHRS2Q13268 280 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 FXYD3Q14802 87 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 TNXAQ16473 311 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 MRGPRG-AS1Q2M3A8 158 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 LYG2Q86SG7 212 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 FAM219AQ8IW50 185 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 SELENOHQ8IZQ5 122 aaKnown RBP11.28□□□□□ -0.6
CHD8-208ENST00000555301 RNASE11Q8TAA1 199 aaKnown RBP11.28□□□□□ -0.6
CHD8-208ENST00000555301 LHFPL5Q8TAF8 219 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 CHPT1Q8WUD6 406 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 GON7Q9BXV9 100 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 PARP11Q9NR21 331 aa11.28□□□□□ -0.6
CHD8-208ENST00000555301 A0A0B4J2A0 478 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 DUXBA0A1W2PPF3 345 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 LINC01548A6NM66 108 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 ATP6V0E1O15342 81 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 IGKV1-5P01602 117 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 HLA-GP17693 338 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 TMEM267Q0VDI3 215 aaPredicted RBP11.27□□□□□ -0.61
CHD8-208ENST00000555301 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 AWAT1Q58HT5 328 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 STPG2Q8N412 459 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 LRTM2Q8N967 370 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 COQ8AQ8NI60 647 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 ABHD5Q8WTS1 349 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 CASTOR1Q8WTX7 329 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 LSM10Q969L4 123 aaKnown RBP11.27□□□□□ -0.61
CHD8-208ENST00000555301 WNT10AQ9GZT5 417 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 FKBP11Q9NYL4 201 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 SHPKQ9UHJ6 478 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
CHD8-208ENST00000555301 C2CD3Q4AC94 2353 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 INMT-MINDY4F8WBC2 141 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 DUS4LO95620 317 aaKnown RBP11.26□□□□□ -0.61
CHD8-208ENST00000555301 VDAC1P21796 283 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 CRIP2P52943 208 aaPredicted RBP11.26□□□□□ -0.61
CHD8-208ENST00000555301 PROK1P58294 105 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 SSBP2P81877 361 aaPredicted RBP11.26□□□□□ -0.61
CHD8-208ENST00000555301 NDPQ00604 133 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 CENPVQ7Z7K6 275 aaPredicted RBP11.26□□□□□ -0.61
CHD8-208ENST00000555301 SLC35G3Q8N808 338 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 OR4A16Q8NH70 328 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 SGMS2Q8NHU3 365 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 GRPEL2Q8TAA5 225 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 SRSF12Q8WXF0 261 aaKnown RBP11.26□□□□□ -0.61
CHD8-208ENST00000555301 TMEM68Q96MH6 324 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 MARVELD1Q9BSK0 173 aa11.26□□□□□ -0.61
CHD8-208ENST00000555301 COMMD5Q9GZQ3 224 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms