RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 PPP1R27Q86WC6 154 aa14.28□□□□□ -0.12
PSEN1-208ENST00000553719 VSTM2AQ8TAG5 236 aa14.28□□□□□ -0.12
PSEN1-208ENST00000553719 TAF15Q92804 592 aaKnown RBP eCLIP14.28□□□□□ -0.12
PSEN1-208ENST00000553719 RBPMSQ93062 196 aaKnown RBP14.28□□□□□ -0.12
PSEN1-208ENST00000553719 OR2A7Q96R45 310 aa14.28□□□□□ -0.12
PSEN1-208ENST00000553719 HSPB9Q9BQS6 159 aa14.28□□□□□ -0.12
PSEN1-208ENST00000553719 AIFM2Q9BRQ8 373 aa14.28□□□□□ -0.12
PSEN1-208ENST00000553719 IGHV7-81A0A0B4J1V7 117 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 A0A0B4J293 547 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 A0A0G2JRQ6 117 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 NDUFA7O95182 113 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 KRASP01116 189 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 IGHG2P01859 326 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 NDPQ00604 133 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 PJVKQ0ZLH3 352 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 PRSS8Q16651 343 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 TMEM268Q5VZI3 342 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 LIN54Q6MZP7 749 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 SSX9Q7RTT3 188 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 OR52B4Q8NGK2 314 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 OR4A5Q8NH83 315 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 MITD1Q8WV92 249 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 RASL11BQ9BPW5 248 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 SEC22CQ9BRL7 303 aa14.27□□□□□ -0.13
PSEN1-208ENST00000553719 ZNF430Q9H8G1 570 aaPredicted RBP14.27□□□□□ -0.13
PSEN1-208ENST00000553719 TRAV3A0A0B4J244 114 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 A0A0B4J2A0 478 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 UPK2O00526 184 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 CA2P00918 260 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 NMSQ5H8A3 153 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 LGI3Q8N145 548 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 SLC35G3Q8N808 338 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 DMBX1Q8NFW5 382 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 ZNF431Q8TF32 576 aaPredicted RBP14.26□□□□□ -0.13
PSEN1-208ENST00000553719 CHPT1Q8WUD6 406 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 C16orf95Q9H693 158 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 SHPKQ9UHJ6 478 aa14.26□□□□□ -0.13
PSEN1-208ENST00000553719 DUXBA0A1W2PPF3 345 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 DBX1A6NMT0 343 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 PRAF2O60831 178 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 OR9G9P0C7N8 305 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 ERVK-16P61578 105 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 ZNF562Q6V9R5 426 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 ZNF695Q8IW36 515 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.25□□□□□ -0.13
PSEN1-208ENST00000553719 CASTOR1Q8WTX7 329 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 LSM10Q969L4 123 aaKnown RBP14.25□□□□□ -0.13
PSEN1-208ENST00000553719 PRSS22Q9GZN4 317 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 ZNF580Q9UK33 172 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 MMP24Q9Y5R2 645 aa14.25□□□□□ -0.13
PSEN1-208ENST00000553719 C7orf66A4D0T2 115 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 LINC01548A6NM66 108 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 ATG12O94817 140 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 HKR1P10072 659 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 VDAC1P21796 283 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 CX3CL1P78423 397 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 PLGLAQ15195 96 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 KRTAP24-1Q3LI83 254 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 AARDQ4LEZ3 155 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 LYZL2Q7Z4W2 148 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 FAM219AQ8IW50 185 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 MMD2Q8IY49 270 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 SERTAD4Q9NUC0 356 aa14.24□□□□□ -0.13
PSEN1-208ENST00000553719 C15orf61A6NNL5 157 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 CREBL2O60519 120 aaPredicted RBP14.23□□□□□ -0.13
PSEN1-208ENST00000553719 CRYBA1P05813 215 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 EGR2P11161 476 aaPredicted RBP14.23□□□□□ -0.13
PSEN1-208ENST00000553719 MAS1LP35410 378 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 AKR1C2P52895 323 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 CRIP2P52943 208 aaPredicted RBP14.23□□□□□ -0.13
PSEN1-208ENST00000553719 RPL8P62917 257 aaKnown RBP14.23□□□□□ -0.13
PSEN1-208ENST00000553719 IZUMO4Q1ZYL8 232 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 TMEM95Q3KNT9 176 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 Q6ZRM9 215 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 H2BFWTQ7Z2G1 175 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 FOXRED2Q8IWF2 684 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 CLCC1Q96S66 551 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 OR51J1Q9H342 316 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 FBXO7Q9Y3I1 522 aa14.23□□□□□ -0.13
PSEN1-208ENST00000553719 PIGBOS1A0A0B4J2F0 54 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 A0A1B0GW64 132 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 SNRPGP15A8MWD9 76 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 KCNAB3O43448 404 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 DHFRP00374 187 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 IGF1P05019 195 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 HLA-GP17693 338 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 COMPP49747 757 aaPredicted RBP14.22□□□□□ -0.13
PSEN1-208ENST00000553719 C19orf54Q5BKX5 351 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 SLC35E3Q7Z769 313 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 MINDY2Q8NBR6 621 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 LINC01006Q8NI28 216 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 COQ8AQ8NI60 647 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 GPR146Q96CH1 333 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 PHB2Q99623 299 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 TMEM14BQ9NUH8 114 aa14.22□□□□□ -0.13
PSEN1-208ENST00000553719 TET2Q6N021 2002 aaPredicted RBP14.22□□□□□ -0.13
PSEN1-208ENST00000553719 CGB1A6NKQ9 187 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 E7EUB6 86 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 ATP6V0E1O15342 81 aa14.21□□□□□ -0.13
PSEN1-208ENST00000553719 MYOD1P15172 320 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms