RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 ENOPH1Q9UHY7 261 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 TAGLN3Q9UI15 199 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 TBC1D24Q9ULP9 559 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 ST3GAL6Q9Y274 331 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF257Q9Y2Q1 563 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 EXOSC1Q9Y3B2 195 aaKnown RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 WASHC3Q9Y3C0 194 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 UFC1Q9Y3C8 167 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 TMED3Q9Y3Q3 217 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 LINC00588Q9Y4M8 146 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 PUS1Q9Y606 427 aaKnown RBP eCLIP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM14AQ9Y6G1 99 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 R4GMQ9 66 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 FAT4Q6V0I7 4981 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 LRP1Q07954 4544 aaKnown RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 VPS13BQ7Z7G8 4022 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 TRBV7-1A0A0A6YYK4 115 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 C15orf62A8K5M9 175 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 PPP5D1E7EU14 171 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 DYNC1I1O14576 645 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 RAB29O14966 203 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 ANGPT2O15123 496 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 GADD45GO95257 159 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 SERPINA3P01011 423 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 IFNGP01579 166 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 HLA-AP01891 365 aaKnown RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 HBZP02008 142 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 ISG15P05161 165 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 REG1AP05451 166 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 GLAP06280 429 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 CRYGCP07315 174 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 PRSS1P07477 247 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 UBCP0CG48 685 aaKnown RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 GNB3P16520 340 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 ATF1P18846 271 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 FGF9P31371 208 aaPredicted RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 ARL3P36405 182 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 IFNGR2P38484 337 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 RBM11P57052 281 aaKnown RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 LINC00315P59091 139 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 DEFA5Q01523 94 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 PJVKQ0ZLH3 352 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 MED21Q13503 144 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 CYLC2Q14093 348 aaPredicted RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 GK3PQ14409 553 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 PLGLAQ15195 96 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 CTF1Q16619 201 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 LTC4SQ16873 150 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 WHAMMP3Q1A5X7 153 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 MICAQ29983 383 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 MPV17LQ2QL34 196 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 LRRC23Q53EV4 343 aaPredicted RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 AGKQ53H12 422 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 SAMD4BQ5PRF9 694 aaKnown RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 SLC25A30Q5SVS4 291 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 C6orf183Q5T699 404 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 BCL2L15Q5TBC7 163 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 DMKNQ6E0U4 476 aaPredicted RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 COMMD2Q86X83 199 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 PDPNQ86YL7 162 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 SERPINA12Q8IW75 414 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 MREGQ8N565 214 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 SUMF2Q8NBJ7 301 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 BBS1Q8NFJ9 593 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 FAM46BQ96A09 425 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 PTX4Q96A99 478 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 ADAT3Q96EY9 351 aaPredicted RBP1.52□□□□□ -2.17
PTCH1-223ENST00000551623 GRAMD2BQ96HH9 432 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 TPD52L3Q96J77 140 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 ST6GAL2Q96JF0 529 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 OR10C1Q96KK4 312 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 C7orf26Q96N11 449 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 OPALINQ96PE5 141 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 OR2A7Q96R45 310 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 SPIN2AQ99865 258 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 SPIN2BQ9BPZ2 258 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 NIPSNAP3BQ9BS92 247 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 ATG101Q9BSB4 218 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 Q9N2K0 584 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 IL1RAPQ9NPH3 570 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 COA4Q9NYJ1 87 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 PIPOXQ9P0Z9 390 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 LAMP5Q9UJQ1 280 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 OR52A1Q9UKL2 312 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 AP3M1Q9Y2T2 418 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 SNX5Q9Y5X3 404 aa1.52□□□□□ -2.17
PTCH1-223ENST00000551623 IGLV11-55A0A075B6I3 123 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 IGHV3-43A0A0B4J1X8 118 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 TRAV39A0A0B4J263 110 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 LOC107986453A0A1B0GWG9 222 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF320A2RRD8 509 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 A6NIN4 97 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 BBIP1A8MTZ0 92 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 SMIM1B2RUZ4 78 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 TEX22C9J3V5 150 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 H3BNG1 76 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 AIPO00170 330 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 NDUFA4O00483 81 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 SYT7O43581 403 aa1.51□□□□□ -2.17
PTCH1-223ENST00000551623 GPX5O75715 221 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms