RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 SETBP1Q9Y6X0 1596 aa0.61□□□□□ -2.31
CCDC38-206ENST00000548771 BAZ2BQ9UIF8 2168 aaKnown RBP0.6□□□□□ -2.31
CCDC38-206ENST00000548771 UNC80Q8N2C7 3258 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 DLG5Q8TDM6 1919 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 ABCC12Q96J65 1359 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 A0A1B0GW54 56 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 ERICH2A1L162 156 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 TRAPPC13A5PLN9 417 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 MEIS3P1A6NDR6 274 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 TRPC5OSA6NMA1 111 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 IL6P05231 212 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 MSNP26038 577 aaKnown RBP0.6□□□□□ -2.31
CCDC38-206ENST00000548771 REG1BP48304 166 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 EVX1P49640 407 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 RPS24P62847 133 aaKnown RBP0.6□□□□□ -2.31
CCDC38-206ENST00000548771 CTAG1AP78358 180 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 SDHAF4Q5VUM1 108 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 DNM1P34Q6PK57 102 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 DCXRQ7Z4W1 244 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 NAA40Q86UY6 237 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 RPP25LQ8N5L8 163 aaKnown RBP0.6□□□□□ -2.31
CCDC38-206ENST00000548771 TESCQ96BS2 214 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 ANKRD36BP1Q96IX9 119 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 ODF3Q96PU9 254 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 NDEL1Q9GZM8 345 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 SLC22A4Q9H015 551 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 MS4A6AQ9H2W1 248 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 SMARCA2P51531 1590 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 NAV1Q8NEY1 1877 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 ALKQ9UM73 1620 aa0.6□□□□□ -2.31
CCDC38-206ENST00000548771 EYSQ5T1H1 3165 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 FLT4P35916 1363 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 INTS1Q8N201 2190 aaKnown RBP0.59□□□□□ -2.31
CCDC38-206ENST00000548771 RIMS2Q9UQ26 1411 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 IGKV1-9A0A0C4DH69 117 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 COX7A2LO14548 114 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 CD40LGP29965 261 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 HAAOP46952 286 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 ASB13Q8WXK3 278 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 GNPNAT1Q96EK6 184 aaPredicted RBP0.59□□□□□ -2.31
CCDC38-206ENST00000548771 CCL13Q99616 98 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 DCUN1D5Q9BTE7 237 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 DERL2Q9GZP9 239 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 CHST6Q9GZX3 395 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 CHMP4BQ9H444 224 aaKnown RBP0.59□□□□□ -2.31
CCDC38-206ENST00000548771 HRASLSQ9HDD0 168 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 SNURFQ9Y675 71 aa0.59□□□□□ -2.31
CCDC38-206ENST00000548771 DICER1Q9UPY3 1922 aaKnown RBP0.59□□□□□ -2.32
CCDC38-206ENST00000548771 SIPA1L1O43166 1804 aa0.59□□□□□ -2.32
CCDC38-206ENST00000548771 KIF21AQ7Z4S6 1674 aa0.59□□□□□ -2.32
CCDC38-206ENST00000548771 CPAMD8Q8IZJ3 1885 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 DIDO1Q9BTC0 2240 aaKnown RBP0.58□□□□□ -2.32
CCDC38-206ENST00000548771 BRCA2P51587 3418 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 PCF11O94913 1555 aaKnown RBP0.58□□□□□ -2.32
CCDC38-206ENST00000548771 RB1CC1Q8TDY2 1594 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 CACNA1AO00555 2505 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 TMEM213A2RRL7 107 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 OR51F1A6NGY5 319 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 SCN2BO60939 215 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 NDUFS6O75380 124 aaKnown RBP0.58□□□□□ -2.32
CCDC38-206ENST00000548771 UBBP0CG47 229 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 UGT2B7P16662 529 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 ACSM3Q53FZ2 586 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 CD302Q8IX05 232 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 Q8N2B8 174 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 TBC1D19Q8N5T2 526 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 UBL4BQ8N7F7 174 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 ZNF676Q8N7Q3 588 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 OR8B3Q8NGG8 313 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 OR2T27Q8NH04 317 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 ERMAPQ96PL5 475 aaPredicted RBP0.58□□□□□ -2.32
CCDC38-206ENST00000548771 CXorf21Q9HAI6 301 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 SPANXB1Q9NS25 103 aaPredicted RBP0.58□□□□□ -2.32
CCDC38-206ENST00000548771 LAMA2P24043 3122 aaKnown RBP0.58□□□□□ -2.32
CCDC38-206ENST00000548771 CEP164Q9UPV0 1460 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 CENPFP49454 3210 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 CFAP47Q6ZTR5 3102 aa0.58□□□□□ -2.32
CCDC38-206ENST00000548771 REREQ9P2R6 1566 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 STRCQ7RTU9 1775 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 MICAL3Q7RTP6 2002 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 PPRC1Q5VV67 1664 aaKnown RBP0.57□□□□□ -2.32
CCDC38-206ENST00000548771 PTPRMP28827 1452 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 TINCRA0A1B0GVN0 87 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 GOLGA6L10A6NI86 522 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 HSBP1L1C9JCN9 74 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 SDCBPO00560 298 aaPredicted RBP0.57□□□□□ -2.32
CCDC38-206ENST00000548771 HPGDSO60760 199 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 APOMO95445 188 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 NPPAP01160 153 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 MSMBP08118 114 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 CCL5P13501 91 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 HIST1H1CP16403 213 aaKnown RBP0.57□□□□□ -2.32
CCDC38-206ENST00000548771 DDTP30046 118 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 CSN1S1P47710 185 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 CXCR4P61073 352 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 DEFB115Q30KQ5 88 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 SBSNQ6UWP8 590 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 HIST2H3AQ71DI3 136 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 DYNAPQ8N1N2 210 aa0.57□□□□□ -2.32
CCDC38-206ENST00000548771 UMODL1-AS1Q8N2C9 162 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms