RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ADARB1P78563 741 aaKnown RBP2.94□□□□□ -1.94
SNHG1-220ENST00000544550 DEFA5Q01523 94 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 CBX3Q13185 183 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 MED21Q13503 144 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 GPR176Q14439 515 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 C15orf32Q32M92 178 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF585BQ52M93 769 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 NXNL2Q5VZ03 156 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 GGNBP1Q5YKI7 109 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 DMKNQ6E0U4 476 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-220ENST00000544550 OR2T5Q6IEZ7 315 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 SPATA12Q7Z6I5 190 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 SLC25A42Q86VD7 318 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 GID4Q8IVV7 300 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 GAPTQ8N292 157 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 C6orf223Q8N319 242 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 PRSS35Q8N3Z0 413 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 Q8NAQ8 132 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 NEXN-AS1Q8NBZ9 246 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 OR51A2Q8NGJ7 313 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 OR2T29Q8NH02 315 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 OR5B3Q8NH48 314 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 GIPC3Q8TF64 312 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 FAM46BQ96A09 425 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 GALMQ96C23 342 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 FEVQ99581 238 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 NICN1Q9BSH3 213 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 CENPOQ9BU64 300 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 IFI27L2Q9H2X8 130 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 MAGIXQ9H6Y5 334 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 TAF9BQ9HBM6 251 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 TVP23BQ9NYZ1 205 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 ABRACLQ9P1F3 81 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 DNAH6Q9C0G6 4158 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 A0A1W2PQL4 384 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 KRTAP29-1A8MX34 341 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 GABRPO00591 440 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 DYNC1I1O14576 645 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 ITGB1BP1O14713 200 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 CCDC22O60826 627 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 OR2J3O76001 311 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 DHFRP00374 187 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 HLA-AP01891 365 aaKnown RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 MAS1P04201 325 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 IGKV1-16P04430 117 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 GLAP06280 429 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 RCC1P18754 421 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 RAB3AP20336 220 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 ATP6V1E1P36543 226 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 AMTP48728 403 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 PPP1R8Q12972 351 aaKnown RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 RIPK1Q13546 671 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 GNMTQ14749 295 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 RPL39P5Q59GN2 51 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 SIGIRRQ6IA17 410 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 SSX6Q7RTT6 188 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 LYPD1Q8N2G4 141 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 OR10K1Q8NGX5 313 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 OR2G2Q8NGZ5 317 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 OR10AC1Q8NH08 325 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 OR4K15Q8NH41 348 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 SRSF12Q8WXF0 261 aaKnown RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 DNAJC9Q8WXX5 260 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 EEF1AKMT3Q96AZ1 226 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 CMTM5Q96DZ9 223 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 SAT2Q96F10 170 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 MYCBPQ99417 103 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 TBX5Q99593 518 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 SPIN2AQ99865 258 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 SPIN2BQ9BPZ2 258 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 RBM38Q9H0Z9 239 aaKnown RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 FGFR1OP2Q9NVK5 253 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 SMPD3Q9NY59 655 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 WARS2Q9UGM6 360 aaKnown RBP2.93□□□□□ -1.94
SNHG1-220ENST00000544550 GNG8Q9UK08 70 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF257Q9Y2Q1 563 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 LRP1BQ9NZR2 4599 aa2.93□□□□□ -1.94
SNHG1-220ENST00000544550 APOBP04114 4563 aaKnown RBP2.92□□□□□ -1.94
SNHG1-220ENST00000544550 TRBV7-1A0A0A6YYK4 115 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF705EA8MWA4 302 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-220ENST00000544550 CTDSP2O14595 271 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 OGG1O15527 345 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 TGOLN2O43493 480 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 PRKYO43930 277 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 SC5DO75845 299 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 FAM107AO95990 144 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 CRYGBP07316 175 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 HTR1AP08908 422 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 APELAP0DMC3 54 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 RRASP10301 218 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 ANXA8P13928 327 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 HIST1H1BP16401 226 aaKnown RBP2.92□□□□□ -1.94
SNHG1-220ENST00000544550 ANXA7P20073 488 aaKnown RBP2.92□□□□□ -1.94
SNHG1-220ENST00000544550 SERPINA2P20848 420 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 PSMB6P28072 239 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 CRISP1P54107 249 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 MFAP4P55083 255 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 PAFAH1B2P68402 229 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 TMED1Q13445 227 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 TNXAQ16473 311 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms