RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 OR4A47Q6IF82 309 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 LCNL1Q6ZST4 164 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 TBC1D26Q86UD7 250 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 MMD2Q8IY49 270 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 POC5Q8NA72 575 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 LFNGQ8NES3 379 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 KLK15Q9H2R5 256 aa14.92□□□□□ -0.02
DDX55-211ENST00000544429 DISC1C4P0D8 188 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 MPPED1O15442 326 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 BRI3O95415 125 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 ECI1P42126 302 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 SURF2Q15527 256 aaPredicted RBP14.91□□□□□ -0.02
DDX55-211ENST00000544429 ECSCRQ19T08 205 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 C18orf65Q6ZTR6 163 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 OR4F17Q8NGA8 305 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 OR51S1Q8NGJ8 323 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 OR5M8Q8NGP6 311 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 OR4A5Q8NH83 315 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 GRPEL2Q8TAA5 225 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 MARCH1Q8TCQ1 289 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 DEDD2Q8WXF8 326 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 TMEM68Q96MH6 324 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 OR4F4Q96R69 305 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 SDHCQ99643 169 aaPredicted RBP14.91□□□□□ -0.02
DDX55-211ENST00000544429 PRRT1Q99946 306 aa14.91□□□□□ -0.02
DDX55-211ENST00000544429 A0A1W2PN81 502 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 A0A1W2PRX2 142 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 CNIH1O95406 144 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 CTSDP07339 412 aaPredicted RBP14.9□□□□□ -0.02
DDX55-211ENST00000544429 PI3P19957 117 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 S100GP29377 79 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 MAS1LP35410 378 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 CHRNA7P36544 502 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 PPP5CP53041 499 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 PIGPP57054 158 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 GNB1P62873 340 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 SCGB2B2Q4G0G5 96 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 UNQ5815/PRO19632Q6UWF5 114 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 ETV3LQ6ZN32 361 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 LINC00299Q6ZSB3 139 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 ZFAND1Q8TCF1 268 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 SRSF12Q8WXF0 261 aaKnown RBP14.9□□□□□ -0.02
DDX55-211ENST00000544429 R3HDM4Q96D70 268 aa14.9□□□□□ -0.02
DDX55-211ENST00000544429 A0A1B0GW64 132 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 IGKV1-39P01597 117 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 IGKV1D-39P04432 117 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 PGAM2P15259 253 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 LPAR6P43657 344 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 RAB9AP51151 201 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 TNXAQ16473 311 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 ZNF491Q8N8L2 437 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 GDPD1Q8N9F7 314 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 FAM110DQ8TAY7 271 aaPredicted RBP14.89□□□□□ -0.03
DDX55-211ENST00000544429 ABHD5Q8WTS1 349 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 UBE2E2Q96LR5 201 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 RTBDNQ9BSG5 229 aaPredicted RBP14.89□□□□□ -0.03
DDX55-211ENST00000544429 GPR132Q9UNW8 380 aa14.89□□□□□ -0.03
DDX55-211ENST00000544429 MSGN1A6NI15 193 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 MARCH11A6NNE9 402 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 E7EUB6 86 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 H0Y980 276 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 UPK2O00526 184 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 AP3S2P59780 193 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 RPL8P62917 257 aaKnown RBP14.88□□□□□ -0.03
DDX55-211ENST00000544429 BAK1Q16611 211 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 CNPY1Q3B7I2 92 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 KHDC1LQ5JSQ8 128 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 C10orf55Q5SWW7 151 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 SSX9Q7RTT3 188 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 ZNF695Q8IW36 515 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 C5orf66Q9H5L9 145 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 HRASLSQ9HDD0 168 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 TMEM140Q9NV12 185 aa14.88□□□□□ -0.03
DDX55-211ENST00000544429 TRAV3A0A0B4J244 114 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 CGB1A6NKQ9 187 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 TEX22C9J3V5 150 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 H3BUA1 57 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 PF4V1P10720 104 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 RUNX1Q01196 453 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 TOMM5Q8N4H5 51 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 KLHL30-AS1Q8NEE0 82 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 WFDC9Q8NEX5 89 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 C4orf3Q8WVX3 66 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 SEC22AQ96IW7 307 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 TP53RKQ96S44 253 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 SPIN2AQ99865 258 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 SPIN2BQ9BPZ2 258 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 SCP2D1Q9UJQ7 156 aa14.87□□□□□ -0.03
DDX55-211ENST00000544429 ACTL6BO94805 426 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 HLA-GP17693 338 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 ZNF45Q02386 682 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 TMEM65Q6PI78 240 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 C8orf86Q6ZUL3 223 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 CCDC71LQ8N9Z2 235 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 ADAD2Q8NCV1 583 aaKnown RBP14.86□□□□□ -0.03
DDX55-211ENST00000544429 P2RX4Q99571 388 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 SLA2Q9H6Q3 261 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 AKIP1Q9NQ31 210 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 BATF3Q9NR55 127 aa14.86□□□□□ -0.03
DDX55-211ENST00000544429 NOTCH3Q9UM47 2321 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms