RNA–Protein interactions for RNA: ENST00000543756.5

DDX11-226, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-226ENST00000543756 SHISA2Q6UWI4 295 aa13.61□□□□□ -0.23
DDX11-226ENST00000543756 VKORC1L1Q8N0U8 176 aa13.61□□□□□ -0.23
DDX11-226ENST00000543756 COMMD1Q8N668 190 aa13.61□□□□□ -0.23
DDX11-226ENST00000543756 SGMS2Q8NHU3 365 aa13.61□□□□□ -0.23
DDX11-226ENST00000543756 TMEM230Q96A57 120 aa13.61□□□□□ -0.23
DDX11-226ENST00000543756 TMEM68Q96MH6 324 aa13.61□□□□□ -0.23
DDX11-226ENST00000543756 CITED1Q99966 193 aa13.61□□□□□ -0.23
DDX11-226ENST00000543756 ZNF430Q9H8G1 570 aaPredicted RBP13.61□□□□□ -0.23
DDX11-226ENST00000543756 KCNIP3Q9Y2W7 256 aa13.61□□□□□ -0.23
DDX11-226ENST00000543756 PIGBOS1A0A0B4J2F0 54 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 TEX13DA0A0J9YY54 714 aaPredicted RBP13.6□□□□□ -0.23
DDX11-226ENST00000543756 ATP6V0E1O15342 81 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 CDS2O95674 445 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 IGKV1-39P01597 117 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 IGKV1D-39P04432 117 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 CFHR3Q02985 330 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 PJVKQ0ZLH3 352 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 C19orf54Q5BKX5 351 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 ADAD2Q8NCV1 583 aaKnown RBP13.6□□□□□ -0.23
DDX11-226ENST00000543756 GLYATL2Q8WU03 294 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 ARPC1AQ92747 370 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 SEC22AQ96IW7 307 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 CLCC1Q96S66 551 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 PARP11Q9NR21 331 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 TMEM140Q9NV12 185 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 TBC1D24Q9ULP9 559 aa13.6□□□□□ -0.23
DDX11-226ENST00000543756 LINC00854A0A1B0GVQ3 168 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 PSMB11A5LHX3 300 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 HAX1O00165 279 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 ARPC1BO15143 372 aaKnown RBP13.59□□□□□ -0.23
DDX11-226ENST00000543756 OR5AC1P0C628 307 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 EGR2P11161 476 aaPredicted RBP13.59□□□□□ -0.23
DDX11-226ENST00000543756 VDAC1P21796 283 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 RPL8P62917 257 aaKnown RBP13.59□□□□□ -0.23
DDX11-226ENST00000543756 SUPT4H1P63272 117 aaKnown RBP13.59□□□□□ -0.23
DDX11-226ENST00000543756 TMEM267Q0VDI3 215 aaPredicted RBP13.59□□□□□ -0.23
DDX11-226ENST00000543756 FXYD3Q14802 87 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 AKIRIN2Q53H80 203 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 MZT2BQ6NZ67 158 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 CENPVQ7Z7K6 275 aaPredicted RBP13.59□□□□□ -0.23
DDX11-226ENST00000543756 SLC25A42Q86VD7 318 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 CENPSQ8N2Z9 138 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 MINDY2Q8NBR6 621 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 DMBX1Q8NFW5 382 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 IL22RA2Q969J5 263 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 TMEM56Q96MV1 263 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 NOL4LQ96MY1 436 aaPredicted RBP13.59□□□□□ -0.23
DDX11-226ENST00000543756 TSC22D3Q99576 134 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 NUBP2Q9Y5Y2 271 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 TMEM56-RWDD3S4R434 201 aa13.59□□□□□ -0.23
DDX11-226ENST00000543756 TRAV41A0A0B4J266 112 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 UPK2O00526 184 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 ACTL6BO94805 426 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 CNIH1O95406 144 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 KRASP01116 189 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 ANXA3P12429 323 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 PPIFP30405 207 aaKnown RBP13.58□□□□□ -0.24
DDX11-226ENST00000543756 KRTAP10-3P60369 221 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 SRPXP78539 464 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 IFITM3Q01628 133 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 SSX9Q7RTT3 188 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 RNF152Q8N8N0 203 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 OR5AU1Q8NGC0 362 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 FBXO7Q9Y3I1 522 aa13.58□□□□□ -0.24
DDX11-226ENST00000543756 IGHG4P01861 327 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 P0C879 139 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 AKR1C4P17516 323 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 HLA-GP17693 338 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 G6PCP35575 357 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 TMEM187Q14656 261 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 TNXAQ16473 311 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 TRIM16LQ309B1 348 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 SP6Q3SY56 376 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 TEX38Q6PEX7 206 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 TMED4Q7Z7H5 227 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 FAM219AQ8IW50 185 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 OR4X2Q8NGF9 303 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 SRSF12Q8WXF0 261 aaKnown RBP13.57□□□□□ -0.24
DDX11-226ENST00000543756 RBPMSQ93062 196 aaKnown RBP13.57□□□□□ -0.24
DDX11-226ENST00000543756 SPIN2AQ99865 258 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 SPIN2BQ9BPZ2 258 aa13.57□□□□□ -0.24
DDX11-226ENST00000543756 ALX4Q9H161 411 aaPredicted RBP13.57□□□□□ -0.24
DDX11-226ENST00000543756 FBXO24O75426 580 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 BRI3O95415 125 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 ELANEP08246 267 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 GNB1P62873 340 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 CD83Q01151 205 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 FOXE3Q13461 319 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 THOC7Q6I9Y2 204 aaKnown RBP13.56□□□□□ -0.24
DDX11-226ENST00000543756 OR5M8Q8NGP6 311 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 SRSF8Q9BRL6 282 aaKnown RBP13.56□□□□□ -0.24
DDX11-226ENST00000543756 FKBP11Q9NYL4 201 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 LINC00527Q9UJ94 153 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 PRNDQ9UKY0 176 aa13.56□□□□□ -0.24
DDX11-226ENST00000543756 IGKV1-5P01602 117 aa13.55□□□□□ -0.24
DDX11-226ENST00000543756 IGLV1-40P01703 118 aa13.55□□□□□ -0.24
DDX11-226ENST00000543756 TCRBP04435 133 aa13.55□□□□□ -0.24
DDX11-226ENST00000543756 MECP2P51608 486 aaKnown RBP13.55□□□□□ -0.24
DDX11-226ENST00000543756 DEFA1P59665 94 aa13.55□□□□□ -0.24
DDX11-226ENST00000543756 DEFA3P59666 94 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms