RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	DHRS2	Q13268	280 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	FXYD3	Q14802	87 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	TNXA	Q16473	311 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	PRSS8	Q16651	343 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	ANKRD55	Q3KP44	614 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545		Q6ZS46	218 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545		Q6ZSV7	163 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	SLC35E3	Q7Z769	313 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	MMD2	Q8IY49	270 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	OR52B4	Q8NGK2	314 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	OR4F5	Q8NH21	305 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	OR4A16	Q8NH70	328 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	OR4A5	Q8NH83	315 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	IL22RA2	Q969J5	263 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	SEC22A	Q96IW7	307 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	TMEM56	Q96MV1	263 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	SEC22C	Q9BRL7	303 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	PARP11	Q9NR21	331 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	BET1L	Q9NYM9	111 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	TMEM56-RWDD3	S4R434	201 aa		8.06	□□□□□ -1.12
CPSF7-221	ENST00000543545	MXRA5	Q9NR99	2828 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	TRAV3	A0A0B4J244	114 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545		A0A0B4J2A0	478 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	UPK2	O00526	184 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	KCNAB3	O43448	404 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	PRAF2	O60831	178 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	DUS4L	O95620	317 aa	Known RBP	8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	HLA-DRB1	P01911	266 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	OPN1MW	P04001	364 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	IL5	P05113	134 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	CRYGB	P07316	175 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	HOXB5	P09067	269 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	OPN1MW2	P0DN77	364 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	OPN1MW3	P0DN78	364 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	VDAC2	P45880	294 aa	Predicted RBP	8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	RPL8	P62917	257 aa	Known RBP	8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	CX3CL1	P78423	397 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	RELB	Q01201	579 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	POU2AF1	Q16633	256 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	ZNF562	Q6V9R5	426 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	LYZL2	Q7Z4W2	148 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	FOXRED2	Q8IWF2	684 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	PUSL1	Q8N0Z8	303 aa	Known RBP	8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	SLC35G3	Q8N808	338 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	GRPEL2	Q8TAA5	225 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	LHFPL5	Q8TAF8	219 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	TMEM167A	Q8TBQ9	72 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	ZNF431	Q8TF32	576 aa	Predicted RBP	8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	PHB2	Q99623	299 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	HSPB9	Q9BQS6	159 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	MARVELD1	Q9BSK0	173 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	COMMD5	Q9GZQ3	224 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	OR51J1	Q9H342	316 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	ZNF430	Q9H8G1	570 aa	Predicted RBP	8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	ZNF702P	Q9H963	129 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	SHPK	Q9UHJ6	478 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	NSG2	Q9Y328	171 aa		8.05	□□□□□ -1.12
CPSF7-221	ENST00000543545	NIPBL	Q6KC79	2804 aa	eCLIP	8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	IGHV7-81	A0A0B4J1V7	117 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	LINC01548	A6NM66	108 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	TSPAN9	O75954	239 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	NDUFA7	O95182	113 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	IFNA21	P01568	189 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	IGKV1-5	P01602	117 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	IGHG2	P01859	326 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	OR9G9	P0C7N8	305 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	HKR1	P10072	659 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	HLA-G	P17693	338 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	VDAC1	P21796	283 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	MECP2	P51608	486 aa	Known RBP	8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	IZUMO4	Q1ZYL8	232 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	TMEM95	Q3KNT9	176 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	THOC7	Q6I9Y2	204 aa	Known RBP	8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	FAM219A	Q8IW50	185 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	C12orf45	Q8N5I9	185 aa	Predicted RBP	8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	TMEM158	Q8WZ71	300 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	ARPC1A	Q92747	370 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	GPR146	Q96CH1	333 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	FYTTD1	Q96QD9	318 aa	Known RBP	8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	HINT2	Q9BX68	163 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	FKBP11	Q9NYL4	201 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	LINC00527	Q9UJ94	153 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	PRND	Q9UKY0	176 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	OR51B2	Q9Y5P1	312 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	MMP24	Q9Y5R2	645 aa		8.04	□□□□□ -1.12
CPSF7-221	ENST00000543545	SETD2	Q9BYW2	2564 aa	Predicted RBP	8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	FAM25E	A8MYX2	175 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	AP4M1	O00189	453 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	SSNA1	O43805	119 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	MYOD1	P15172	320 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	MAS1L	P35410	378 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	RPL27A	P46776	148 aa	Known RBP	8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	RIPPLY3	P57055	190 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	OR2B8P	P59922	312 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	TMEM267	Q0VDI3	215 aa	Predicted RBP	8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	FOXL1	Q12952	345 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	ECSCR	Q19T08	205 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	KRTAP24-1	Q3LI83	254 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	CENPV	Q7Z7K6	275 aa	Predicted RBP	8.03	□□□□□ -1.12

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms