RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 IGHV2-70P01814 119 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 HBE1P02100 147 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 IGKV1-16P04430 117 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 LYNX1P0DP58 116 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 ZNF137PP52743 207 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 ZNF841Q6ZN19 808 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 CBLN2Q8IUK8 224 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 H1FXQ92522 213 aaKnown RBP11.55□□□□□ -0.56
LDB3-207ENST00000542786 CACNA1AO00555 2505 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 TMEM8BA6NDV4 472 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 H0YJW9 148 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 RRHO14718 337 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 SCAF4O95104 1147 aaKnown RBP11.55□□□□□ -0.56
LDB3-207ENST00000542786 SRP19P09132 144 aaKnown RBP11.55□□□□□ -0.56
LDB3-207ENST00000542786 HFEQ30201 348 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 C11orf71Q6IPW1 123 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 FAM71F2Q6NXP2 309 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 TMEM88Q6PEY1 159 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 OR5AN1Q8NGI8 311 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 OR13D1Q8NGV5 346 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 CA5BP1Q8WTZ4 195 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 AIFM2Q9BRQ8 373 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 SLC35D1Q9NTN3 355 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 WDR83OSQ9Y284 106 aa11.55□□□□□ -0.56
LDB3-207ENST00000542786 YLPM1P49750 1951 aaKnown RBP11.54□□□□□ -0.56
LDB3-207ENST00000542786 TRBV23-1A0A0A0MS06 115 aa11.54□□□□□ -0.56
LDB3-207ENST00000542786 LOC102723971A0A1B0GUV8 181 aa11.54□□□□□ -0.56
LDB3-207ENST00000542786 UPK2O00526 184 aa11.54□□□□□ -0.56
LDB3-207ENST00000542786 HRASP01112 189 aa11.54□□□□□ -0.56
LDB3-207ENST00000542786 SFTPCP11686 197 aa11.54□□□□□ -0.56
LDB3-207ENST00000542786 FGF7P21781 194 aa11.54□□□□□ -0.56
LDB3-207ENST00000542786 RAB2AP61019 212 aa11.54□□□□□ -0.56
LDB3-207ENST00000542786 HSPE1P61604 102 aaKnown RBP11.54□□□□□ -0.56
LDB3-207ENST00000542786 RPP25LQ8N5L8 163 aaKnown RBP11.54□□□□□ -0.56
LDB3-207ENST00000542786 J3QR06 171 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 MYOD1P15172 320 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 RTL8BQ17RB0 113 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 NPCDR1Q9BY65 106 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 NBASA2RRP1 2371 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 ELLP55199 621 aaPredicted RBP11.53□□□□□ -0.56
LDB3-207ENST00000542786 PMS2P11Q13670 270 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 DIAPH2-AS1Q14236 149 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 HAGHQ16775 308 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 TMEM177Q53S58 311 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 ETV3LQ6ZN32 361 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 NABP2Q9BQ15 211 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 GGACTQ9BVM4 153 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 HEYLQ9NQ87 328 aaPredicted RBP11.53□□□□□ -0.56
LDB3-207ENST00000542786 ZNF257Q9Y2Q1 563 aa11.53□□□□□ -0.56
LDB3-207ENST00000542786 ITPR1Q14643 2758 aa11.52□□□□□ -0.57
LDB3-207ENST00000542786 HSPB1P04792 205 aaKnown RBP11.52□□□□□ -0.57
LDB3-207ENST00000542786 IGHV1-8P0DP01 117 aa11.52□□□□□ -0.57
LDB3-207ENST00000542786 DLK1P80370 383 aa11.52□□□□□ -0.57
LDB3-207ENST00000542786 ZNF787Q6DD87 383 aa11.52□□□□□ -0.57
LDB3-207ENST00000542786 ABHD12Q8N2K0 398 aa11.52□□□□□ -0.57
LDB3-207ENST00000542786 C1orf159Q96HA4 380 aa11.52□□□□□ -0.57
LDB3-207ENST00000542786 BET1LQ9NYM9 111 aa11.52□□□□□ -0.57
LDB3-207ENST00000542786 PRNDQ9UKY0 176 aa11.52□□□□□ -0.57
LDB3-207ENST00000542786 KALRNO60229 2985 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 SAA1P0DJI8 122 aaPredicted RBP11.51□□□□□ -0.57
LDB3-207ENST00000542786 OR13C7P0DN81 318 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 KHDC3LQ587J8 217 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 LCN15Q6UWW0 184 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 OR10G4Q8NGN3 311 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 OSR1Q8TAX0 266 aaPredicted RBP11.51□□□□□ -0.57
LDB3-207ENST00000542786 C17orf50Q8WW18 174 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 RAB39BQ96DA2 213 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 RALYQ9UKM9 306 aaKnown RBP11.51□□□□□ -0.57
LDB3-207ENST00000542786 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 IFNA10P01566 189 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 BCL2P10415 239 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 CD1BP29016 333 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 HOXA1P49639 335 aaPredicted RBP11.51□□□□□ -0.57
LDB3-207ENST00000542786 RPP30P78346 268 aaKnown RBP11.51□□□□□ -0.57
LDB3-207ENST00000542786 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 AWAT1Q58HT5 328 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 OR9G1Q8NH87 305 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 C8orf46Q8TAG6 207 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 CLCC1Q96S66 551 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 CBLN4Q9NTU7 201 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 OR51B2Q9Y5P1 312 aa11.51□□□□□ -0.57
LDB3-207ENST00000542786 KBTBD11O94819 623 aa11.5□□□□□ -0.57
LDB3-207ENST00000542786 REG1BP48304 166 aa11.5□□□□□ -0.57
LDB3-207ENST00000542786 FGF8P55075 233 aaPredicted RBP11.5□□□□□ -0.57
LDB3-207ENST00000542786 BSXQ3C1V8 233 aa11.5□□□□□ -0.57
LDB3-207ENST00000542786 FFAR4Q5NUL3 377 aa11.5□□□□□ -0.57
LDB3-207ENST00000542786 TREML4Q6UXN2 200 aa11.5□□□□□ -0.57
LDB3-207ENST00000542786 RXFP4Q8TDU9 374 aa11.5□□□□□ -0.57
LDB3-207ENST00000542786 TMEM186Q96B77 213 aa11.5□□□□□ -0.57
LDB3-207ENST00000542786 TMEM133Q9H2Q1 129 aa11.5□□□□□ -0.57
LDB3-207ENST00000542786 LSM4Q9Y4Z0 139 aaKnown RBP11.5□□□□□ -0.57
LDB3-207ENST00000542786 ABCA4P78363 2273 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 TEX50A0A1B0GTY4 177 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 A0A1W2PPR1 153 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 EIF3GO75821 320 aaKnown RBP eCLIP11.49□□□□□ -0.57
LDB3-207ENST00000542786 IGLV2-23P01705 113 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 APOA2P02652 100 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 SOD3P08294 240 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 FBP1P09467 338 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms