RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SLC25A22Q9H936 323 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.84□□□□□ -0.35
MKS1-204ENST00000537529 A0A1W2PPH5 198 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 TNFRSF13BO14836 293 aaPredicted RBP12.84□□□□□ -0.35
MKS1-204ENST00000537529 MPDU1O75352 247 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 CT45A6P0DMU7 189 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 CT45A5P0DMU8 189 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 CT45A7P0DMV0 189 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 HSPE1P61604 102 aaKnown RBP12.84□□□□□ -0.35
MKS1-204ENST00000537529 DLK1P80370 383 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 ACOT6Q3I5F7 207 aaPredicted RBP12.84□□□□□ -0.35
MKS1-204ENST00000537529 TMEM200BQ69YZ2 307 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 ZNF833PQ6ZTB9 187 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 PRNDQ9UKY0 176 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 MGAQ8IWI9 3026 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 ZGRF1Q86YA3 2104 aa12.83□□□□□ -0.35
MKS1-204ENST00000537529 PTPRZ1P23471 2315 aaPredicted RBP12.83□□□□□ -0.36
MKS1-204ENST00000537529 ACACAQ13085 2346 aa12.83□□□□□ -0.36
MKS1-204ENST00000537529 SMCO3A2RU48 225 aa12.83□□□□□ -0.36
MKS1-204ENST00000537529 FAM90A27PA6NNH2 459 aa12.83□□□□□ -0.36
MKS1-204ENST00000537529 RRHO14718 337 aa12.83□□□□□ -0.36
MKS1-204ENST00000537529 CCL3L1P16619 93 aa12.83□□□□□ -0.36
MKS1-204ENST00000537529 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.36
MKS1-204ENST00000537529 FBXL19-AS1Q494R0 122 aa12.83□□□□□ -0.36
MKS1-204ENST00000537529 OR13D1Q8NGV5 346 aa12.83□□□□□ -0.36
MKS1-204ENST00000537529 DSCAML1Q8TD84 2053 aa12.83□□□□□ -0.36
MKS1-204ENST00000537529 A0A1W2PPE2 198 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 CYB5BO43169 146 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 CHRNB4P30926 498 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 RAB13P51153 203 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 RNF212Q495C1 297 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 LYPD2Q6UXB3 125 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 ST6GALNAC3Q8NDV1 305 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 CA5BP1Q8WTZ4 195 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 ISOC2Q96AB3 205 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 KAAG1Q9UBP8 84 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 A0A087WWC5 75 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 IGHV1-69-2A0A0G2JMI3 117 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 PRSS46E5RG02 174 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 NDUFA2O43678 99 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 FCN3O75636 299 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 OR2C1O95371 312 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 APOA2P02652 100 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 IFNA4P05014 189 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 RAB5BP61020 215 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 FAM90A2PQ658T7 463 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 MANBALQ9NQG1 85 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 OR51B2Q9Y5P1 312 aa12.82□□□□□ -0.36
MKS1-204ENST00000537529 PLCE1Q9P212 2302 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 BOD1L1Q8NFC6 3051 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 UPK2O00526 184 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 CCL21O00585 134 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 DVL1O14640 695 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 NPY1RP25929 384 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 ABHD12Q8N2K0 398 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 SLC24A4Q8NFF2 622 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 ZNRD1Q9P1U0 126 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 ZNF257Q9Y2Q1 563 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 RP1L1Q8IWN7 2480 aaPredicted RBP12.81□□□□□ -0.36
MKS1-204ENST00000537529 C1orf196B1AJZ1 125 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 TSPAN9O75954 239 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 PSMB3P49720 205 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 MRPL20Q9BYC9 149 aaKnown RBP12.81□□□□□ -0.36
MKS1-204ENST00000537529 SAV1Q9H4B6 383 aaPredicted RBP12.81□□□□□ -0.36
MKS1-204ENST00000537529 KCNIP2Q9NS61 270 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 CTSZQ9UBR2 303 aa12.81□□□□□ -0.36
MKS1-204ENST00000537529 B4DEV8 164 aa12.8□□□□□ -0.36
MKS1-204ENST00000537529 EIF3GO75821 320 aaKnown RBP eCLIP12.8□□□□□ -0.36
MKS1-204ENST00000537529 IL6RP08887 468 aaPredicted RBP12.8□□□□□ -0.36
MKS1-204ENST00000537529 LOXP28300 417 aaPredicted RBP12.8□□□□□ -0.36
MKS1-204ENST00000537529 OPRK1P41145 380 aa12.8□□□□□ -0.36
MKS1-204ENST00000537529 CDC34P49427 236 aaPredicted RBP12.8□□□□□ -0.36
MKS1-204ENST00000537529 ERVFRD-1P60508 538 aa12.8□□□□□ -0.36
MKS1-204ENST00000537529 PNRC1Q12796 327 aaPredicted RBP12.8□□□□□ -0.36
MKS1-204ENST00000537529 FAM71F2Q6NXP2 309 aa12.8□□□□□ -0.36
MKS1-204ENST00000537529 TREML4Q6UXN2 200 aa12.8□□□□□ -0.36
MKS1-204ENST00000537529 Q8N7P7 452 aa12.8□□□□□ -0.36
MKS1-204ENST00000537529 LINC01560Q8TB33 94 aa12.8□□□□□ -0.36
MKS1-204ENST00000537529 TMEM170AQ8WVE7 144 aa12.8□□□□□ -0.36
MKS1-204ENST00000537529 BIN3Q9NQY0 253 aa12.8□□□□□ -0.36
MKS1-204ENST00000537529 SEC14L6B5MCN3 397 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 HMGB3O15347 200 aaKnown RBP12.79□□□□□ -0.36
MKS1-204ENST00000537529 NDUFS6O75380 124 aaKnown RBP12.79□□□□□ -0.36
MKS1-204ENST00000537529 IGKV1-16P04430 117 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 RAB5AP20339 215 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 MEF2BQ02080 365 aaPredicted RBP12.79□□□□□ -0.36
MKS1-204ENST00000537529 FAM24BQ8N5W8 94 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 LINC00311Q8N616 119 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 OSR1Q8TAX0 266 aaPredicted RBP12.79□□□□□ -0.36
MKS1-204ENST00000537529 PLEKHA3Q9HB20 300 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 SIRT7Q9NRC8 400 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 FKBP11Q9NYL4 201 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 BET1LQ9NYM9 111 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 DIDO1Q9BTC0 2240 aaKnown RBP12.79□□□□□ -0.36
MKS1-204ENST00000537529 KBTBD11O94819 623 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 MAS1LP35410 378 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 PRCDQ00LT1 54 aa12.79□□□□□ -0.36
MKS1-204ENST00000537529 OR10X1Q8NGY0 326 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms