RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 RLN1P04808 185 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 TAS2R31P59538 309 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 TAS2R19P59542 299 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 IL18Q14116 193 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 DEFB136Q30KP8 78 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 OXLD1Q5BKU9 147 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 CMTM1Q8IZ96 169 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 CASTOR1Q8WTX7 329 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 DUX3Q96PT4 197 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 SLA2Q9H6Q3 261 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 PLEKHA2Q9HB19 425 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 BET1LQ9NYM9 111 aa15.88■□□□□ 0.13
CCS-208ENST00000533244 IL6RP08887 468 aaPredicted RBP15.87■□□□□ 0.13
CCS-208ENST00000533244 F2RP25116 425 aa15.87■□□□□ 0.13
CCS-208ENST00000533244 DEFA6Q01524 100 aa15.87■□□□□ 0.13
CCS-208ENST00000533244 POC5Q8NA72 575 aa15.87■□□□□ 0.13
CCS-208ENST00000533244 OR4D10Q8NGI6 311 aa15.87■□□□□ 0.13
CCS-208ENST00000533244 RCC1LQ96I51 464 aaKnown RBP15.87■□□□□ 0.13
CCS-208ENST00000533244 AIFM2Q9BRQ8 373 aa15.87■□□□□ 0.13
CCS-208ENST00000533244 COMMD9Q9P000 198 aa15.87■□□□□ 0.13
CCS-208ENST00000533244 DNAH3Q8TD57 4116 aa15.87■□□□□ 0.13
CCS-208ENST00000533244 MSGN1A6NI15 193 aa15.86■□□□□ 0.13
CCS-208ENST00000533244 GSTZ1O43708 216 aaPredicted RBP15.86■□□□□ 0.13
CCS-208ENST00000533244 IFNA6P05013 189 aa15.86■□□□□ 0.13
CCS-208ENST00000533244 IGLL1P15814 213 aa15.86■□□□□ 0.13
CCS-208ENST00000533244 NQO2P16083 231 aa15.86■□□□□ 0.13
CCS-208ENST00000533244 C10orf55Q5SWW7 151 aa15.86■□□□□ 0.13
CCS-208ENST00000533244 OR4A47Q6IF82 309 aa15.86■□□□□ 0.13
CCS-208ENST00000533244 STEAP1BQ6NZ63 245 aa15.86■□□□□ 0.13
CCS-208ENST00000533244 SLC38A6Q8IZM9 456 aa15.86■□□□□ 0.13
CCS-208ENST00000533244 OR4A5Q8NH83 315 aa15.86■□□□□ 0.13
CCS-208ENST00000533244 ACTL6BO94805 426 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 S1PR2O95136 353 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 CD40LGP29965 261 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 MAS1LP35410 378 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 SSX9Q7RTT3 188 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 OR5T1Q8NG75 326 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 DGCR14Q96DF8 476 aaKnown RBP15.85■□□□□ 0.13
CCS-208ENST00000533244 FAM212BQ9NTI7 297 aaPredicted RBP15.85■□□□□ 0.13
CCS-208ENST00000533244 DUS4LO95620 317 aaKnown RBP15.85■□□□□ 0.13
CCS-208ENST00000533244 RAB3DO95716 219 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 FGF2P09038 288 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 ZNF735P0CB33 412 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 TPPP2P59282 170 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 ZNF585BQ52M93 769 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 PHLDA2Q53GA4 152 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 ADAD2Q8NCV1 583 aaKnown RBP15.85■□□□□ 0.13
CCS-208ENST00000533244 MS4A10Q96PG2 267 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 PHB2Q99623 299 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 SPIN2AQ99865 258 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 SPIN2BQ9BPZ2 258 aa15.85■□□□□ 0.13
CCS-208ENST00000533244 FABP12A6NFH5 140 aa15.84■□□□□ 0.13
CCS-208ENST00000533244 TEX22C9J3V5 150 aa15.84■□□□□ 0.13
CCS-208ENST00000533244 TRGV3P03979 118 aa15.84■□□□□ 0.13
CCS-208ENST00000533244 LGALS1P09382 135 aaKnown RBP15.84■□□□□ 0.13
CCS-208ENST00000533244 RND3P61587 244 aa15.84■□□□□ 0.13
CCS-208ENST00000533244 CADM3Q8N126 398 aa15.84■□□□□ 0.13
CCS-208ENST00000533244 OR11H1Q8NG94 326 aa15.84■□□□□ 0.13
CCS-208ENST00000533244 ZNF486Q96H40 463 aaPredicted RBP15.84■□□□□ 0.13
CCS-208ENST00000533244 OR5B12Q96R08 314 aa15.84■□□□□ 0.13
CCS-208ENST00000533244 SLC2A9Q9NRM0 540 aa15.84■□□□□ 0.13
CCS-208ENST00000533244 A0A1B0GW64 132 aa15.83■□□□□ 0.12
CCS-208ENST00000533244 OR9G9P0C7N8 305 aa15.83■□□□□ 0.12
CCS-208ENST00000533244 S100GP29377 79 aa15.83■□□□□ 0.12
CCS-208ENST00000533244 RPL27AP46776 148 aaKnown RBP15.83■□□□□ 0.12
CCS-208ENST00000533244 RPL8P62917 257 aaKnown RBP15.83■□□□□ 0.12
CCS-208ENST00000533244 MEF2DQ14814 521 aa15.83■□□□□ 0.12
CCS-208ENST00000533244 TBC1D26Q86UD7 250 aa15.83■□□□□ 0.12
CCS-208ENST00000533244 TERB2Q8NHR7 220 aa15.83■□□□□ 0.12
CCS-208ENST00000533244 MRGPRFQ96AM1 343 aa15.83■□□□□ 0.12
CCS-208ENST00000533244 TMEM140Q9NV12 185 aa15.83■□□□□ 0.12
CCS-208ENST00000533244 ANKRD20A5PA0PJZ0 165 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 E7EUB6 86 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 UPK2O00526 184 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 APELAP0DMC3 54 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 HLA-GP17693 338 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 PTBP1P26599 531 aaKnown RBP eCLIP15.82■□□□□ 0.127e-6■■□□□ 11.4
CCS-208ENST00000533244 LPAR6P43657 344 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 ZNF616Q08AN1 781 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 TTC9CQ8N5M4 171 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 OR1N2Q8NGR9 330 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 ALX4Q9H161 411 aaPredicted RBP15.82■□□□□ 0.12
CCS-208ENST00000533244 V9GYH0 126 aa15.82■□□□□ 0.12
CCS-208ENST00000533244 TRAV3A0A0B4J244 114 aa15.81■□□□□ 0.12
CCS-208ENST00000533244 CGB1A6NKQ9 187 aa15.81■□□□□ 0.12
CCS-208ENST00000533244 MARCH11A6NNE9 402 aa15.81■□□□□ 0.12
CCS-208ENST00000533244 AKAIN1P0CW23 69 aa15.81■□□□□ 0.12
CCS-208ENST00000533244 FAAP20Q6NZ36 180 aa15.81■□□□□ 0.12
CCS-208ENST00000533244 OR4C16Q8NGL9 310 aa15.81■□□□□ 0.12
CCS-208ENST00000533244 MCRIP2Q9BUT9 160 aaKnown RBP15.81■□□□□ 0.12
CCS-208ENST00000533244 HRASLSQ9HDD0 168 aa15.81■□□□□ 0.12
CCS-208ENST00000533244 ZNF355PQ9NSJ1 428 aa15.81■□□□□ 0.12
CCS-208ENST00000533244 COA4Q9NYJ1 87 aa15.81■□□□□ 0.12
CCS-208ENST00000533244 PRKDCP78527 4128 aaKnown RBP15.81■□□□□ 0.12
CCS-208ENST00000533244 MPPED1O15442 326 aa15.8■□□□□ 0.12
CCS-208ENST00000533244 IGHV3-11P01762 117 aa15.8■□□□□ 0.12
CCS-208ENST00000533244 OR8U8P0C7N1 319 aa15.8■□□□□ 0.12
CCS-208ENST00000533244 MYOD1P15172 320 aa15.8■□□□□ 0.12
CCS-208ENST00000533244 PGAM2P15259 253 aa15.8■□□□□ 0.12
CCS-208ENST00000533244 PPP5CP53041 499 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms