RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 C2orf68Q2NKX9 166 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 LCNL1Q6ZST4 164 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 MMD2Q8IY49 270 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 GRPEL2Q8TAA5 225 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 VSTM2AQ8TAG5 236 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 TMEM167AQ8TBQ9 72 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 ABHD5Q8WTS1 349 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 OR2A7Q96R45 310 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 AIFM2Q9BRQ8 373 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 RTBDNQ9BSG5 229 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-214ENST00000533209 AKIP1Q9NQ31 210 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 FAM212BQ9NTI7 297 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-214ENST00000533209 BET1LQ9NYM9 111 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 COMMD9Q9P000 198 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 GPR132Q9UNW8 380 aa9.38□□□□□ -0.91
SSBP3-214ENST00000533209 TSSC4Q9Y5U2 329 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-214ENST00000533209 WNK1Q9H4A3 2382 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 CREBL2O60519 120 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-214ENST00000533209 RPLP1P05386 114 aaKnown RBP9.37□□□□□ -0.91
SSBP3-214ENST00000533209 PSMB8P28062 276 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 FAUP35544 74 aaKnown RBP9.37□□□□□ -0.91
SSBP3-214ENST00000533209 ECI1P42126 302 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 RPL23AP62750 156 aaKnown RBP9.37□□□□□ -0.91
SSBP3-214ENST00000533209 TMEM267Q0VDI3 215 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-214ENST00000533209 AKIRIN2Q53H80 203 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 C10orf55Q5SWW7 151 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 OR4A47Q6IF82 309 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 UNQ5815/PRO19632Q6UWF5 114 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 LINC00299Q6ZSB3 139 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 LFNGQ8NES3 379 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 MYOZ3Q8TDC0 251 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 DEDD2Q8WXF8 326 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 R3HDM4Q96D70 268 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 MCUBQ9NWR8 336 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 PTTG2Q9NZH5 202 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 SCP2D1Q9UJQ7 156 aa9.37□□□□□ -0.91
SSBP3-214ENST00000533209 FOXA2Q9Y261 457 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-214ENST00000533209 TNCP24821 2201 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 TET2Q6N021 2002 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-214ENST00000533209 TRAV3A0A0B4J244 114 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 A0A1W2PN81 502 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 H0Y980 276 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 IGKV1-39P01597 117 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 IGKV1D-39P04432 117 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 RPA2P15927 270 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 MAS1LP35410 378 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 CHRNA7P36544 502 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 CXorf66Q5JRM2 361 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-214ENST00000533209 KHDC1LQ5JSQ8 128 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 ASPHD1Q5U4P2 390 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 ZNF57Q68EA5 555 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-214ENST00000533209 C18orf65Q6ZTR6 163 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 CCDC71LQ8N9Z2 235 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 DMBX1Q8NFW5 382 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 OR4A5Q8NH83 315 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 SRSF12Q8WXF0 261 aaKnown RBP9.36□□□□□ -0.91
SSBP3-214ENST00000533209 TP53RKQ96S44 253 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 KLK15Q9H2R5 256 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 ZFP57Q9NU63 452 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 TMEM140Q9NV12 185 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 COPZ2Q9P299 210 aa9.36□□□□□ -0.91
SSBP3-214ENST00000533209 C14orf166Q9Y224 244 aaKnown RBP9.36□□□□□ -0.91
SSBP3-214ENST00000533209 C3orf85A0A1B0GTC6 90 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 A0A1B0GW64 132 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 MSGN1A6NI15 193 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 UPK2O00526 184 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 ACTL6BO94805 426 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 KRASP01116 189 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 PF4V1P10720 104 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 IL7P13232 177 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 MYOD1P15172 320 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 G6PCP35575 357 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 ERVK-16P61578 105 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 RPL8P62917 257 aaKnown RBP9.35□□□□□ -0.91
SSBP3-214ENST00000533209 KIAA0141Q14154 515 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-214ENST00000533209 TRIQKQ629K1 86 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 CADM3Q8N126 398 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 SEC22AQ96IW7 307 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 TMEM68Q96MH6 324 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 VSIG4Q9Y279 399 aa9.35□□□□□ -0.91
SSBP3-214ENST00000533209 CRYM-AS1A6NIL9 109 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 TEX22C9J3V5 150 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 E7EUB6 86 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 SERPINE2P07093 398 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 FGF2P09038 288 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 APELAP0DMC3 54 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 HLA-GP17693 338 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 RPL27AP46776 148 aaKnown RBP9.34□□□□□ -0.91
SSBP3-214ENST00000533209 CDX1P47902 265 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-214ENST00000533209 INPP1P49441 399 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 RAB9AP51151 201 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 SP6Q3SY56 376 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 TMEM65Q6PI78 240 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 TREML4Q6UXN2 200 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 ADAD2Q8NCV1 583 aaKnown RBP9.34□□□□□ -0.91
SSBP3-214ENST00000533209 OR5T1Q8NG75 326 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 OR4F17Q8NGA8 305 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 OR5M8Q8NGP6 311 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms