RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ECSCRQ19T08 205 aa19.45■□□□□ 0.7
USP48-214ENST00000532737 OR4A47Q6IF82 309 aa19.45■□□□□ 0.7
USP48-214ENST00000532737 CCDC71LQ8N9Z2 235 aa19.45■□□□□ 0.7
USP48-214ENST00000532737 VSTM2AQ8TAG5 236 aa19.45■□□□□ 0.7
USP48-214ENST00000532737 R3HDM4Q96D70 268 aa19.45■□□□□ 0.7
USP48-214ENST00000532737 AIFM2Q9BRQ8 373 aa19.45■□□□□ 0.7
USP48-214ENST00000532737 FAM212BQ9NTI7 297 aaPredicted RBP19.45■□□□□ 0.7
USP48-214ENST00000532737 C14orf166Q9Y224 244 aaKnown RBP19.45■□□□□ 0.7
USP48-214ENST00000532737 TNCP24821 2201 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 TCRBV4S1A1TA0A5B7 111 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 ADARB2-AS1A8MUL3 147 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 KBTBD11O94819 623 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 TNXAQ16473 311 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 MMD2Q8IY49 270 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 COMMD1Q8N668 190 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 MINDY2Q8NBR6 621 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 LFNGQ8NES3 379 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 TP53RKQ96S44 253 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 VSIG4Q9Y279 399 aa19.44■□□□□ 0.7
USP48-214ENST00000532737 LINC00854A0A1B0GVQ3 168 aa19.43■□□□□ 0.7
USP48-214ENST00000532737 IGHG4P01861 327 aa19.43■□□□□ 0.7
USP48-214ENST00000532737 IL6RP08887 468 aaPredicted RBP19.43■□□□□ 0.7
USP48-214ENST00000532737 TEX38Q6PEX7 206 aa19.43■□□□□ 0.7
USP48-214ENST00000532737 S100ZQ8WXG8 99 aa19.43■□□□□ 0.7
USP48-214ENST00000532737 BET1LQ9NYM9 111 aa19.43■□□□□ 0.7
USP48-214ENST00000532737 TRAV3A0A0B4J244 114 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 C3orf85A0A1B0GTC6 90 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 H0Y980 276 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 KRASP01116 189 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 TMEM267Q0VDI3 215 aaPredicted RBP19.42■□□□□ 0.7
USP48-214ENST00000532737 SP6Q3SY56 376 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 C10orf55Q5SWW7 151 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 UNQ5815/PRO19632Q6UWF5 114 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 LCNL1Q6ZST4 164 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 NDUFA11Q86Y39 141 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 DMBX1Q8NFW5 382 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 TMEM140Q9NV12 185 aa19.42■□□□□ 0.7
USP48-214ENST00000532737 MARCH11A6NNE9 402 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 UPK2O00526 184 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 SOX15O60248 233 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 CREBL2O60519 120 aaPredicted RBP19.41■□□□□ 0.7
USP48-214ENST00000532737 IGKV1-39P01597 117 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 IGKV1D-39P04432 117 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 G6PCP35575 357 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 ERVK-16P61578 105 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 FOXE3Q13461 319 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 NSUN5P1Q3KNT7 163 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 AKIRIN2Q53H80 203 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 ADAD2Q8NCV1 583 aaKnown RBP19.41■□□□□ 0.7
USP48-214ENST00000532737 OR4A5Q8NH83 315 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 SRSF12Q8WXF0 261 aaKnown RBP19.41■□□□□ 0.7
USP48-214ENST00000532737 SCGB3A2Q96PL1 93 aa19.41■□□□□ 0.7
USP48-214ENST00000532737 A0A1W2PN81 502 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 A0A1W2PRX2 142 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 MSGN1A6NI15 193 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 M0QZ24 198 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 ACTL6BO94805 426 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 IGLV1-40P01703 118 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 OPN1MWP04001 364 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 SERPINE2P07093 398 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 ELANEP08246 267 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 OPN1MW2P0DN77 364 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 OPN1MW3P0DN78 364 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 MYOD1P15172 320 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 CHRNA7P36544 502 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 ASPHD1Q5U4P2 390 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 RNF152Q8N8N0 203 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 TMEM230Q96A57 120 aa19.4■□□□□ 0.7
USP48-214ENST00000532737 FOXA2Q9Y261 457 aaPredicted RBP19.4■□□□□ 0.7
USP48-214ENST00000532737 TSSC4Q9Y5U2 329 aaPredicted RBP19.4■□□□□ 0.7
USP48-214ENST00000532737 TEX13DA0A0J9YY54 714 aaPredicted RBP19.39■□□□□ 0.69
USP48-214ENST00000532737 RPLP1P05386 114 aaKnown RBP19.39■□□□□ 0.69
USP48-214ENST00000532737 PSMB8P28062 276 aa19.39■□□□□ 0.69
USP48-214ENST00000532737 RPL8P62917 257 aaKnown RBP19.39■□□□□ 0.69
USP48-214ENST00000532737 KHDC1LQ5JSQ8 128 aa19.39■□□□□ 0.69
USP48-214ENST00000532737 PRR31Q5SQ13 230 aa19.39■□□□□ 0.69
USP48-214ENST00000532737 CCDC32Q9BV29 185 aa19.39■□□□□ 0.69
USP48-214ENST00000532737 KLK15Q9H2R5 256 aa19.39■□□□□ 0.69
USP48-214ENST00000532737 NAA60Q9H7X0 242 aa19.39■□□□□ 0.69
USP48-214ENST00000532737 TRRAPQ9Y4A5 3859 aa19.39■□□□□ 0.69
USP48-214ENST00000532737 TET2Q6N021 2002 aaPredicted RBP19.39■□□□□ 0.69
USP48-214ENST00000532737 NAP1L6A6NFF2 107 aa19.38■□□□□ 0.69
USP48-214ENST00000532737 CRYM-AS1A6NIL9 109 aa19.38■□□□□ 0.69
USP48-214ENST00000532737 TSPAN15O95858 294 aa19.38■□□□□ 0.69
USP48-214ENST00000532737 APELAP0DMC3 54 aa19.38■□□□□ 0.69
USP48-214ENST00000532737 HLA-GP17693 338 aa19.38■□□□□ 0.69
USP48-214ENST00000532737 MAS1LP35410 378 aa19.38■□□□□ 0.69
USP48-214ENST00000532737 CCR6P51684 374 aa19.38■□□□□ 0.69
USP48-214ENST00000532737 C2orf68Q2NKX9 166 aa19.38■□□□□ 0.69
USP48-214ENST00000532737 CXorf66Q5JRM2 361 aaPredicted RBP19.38■□□□□ 0.69
USP48-214ENST00000532737 SEC22AQ96IW7 307 aa19.38■□□□□ 0.69
USP48-214ENST00000532737 SLC25A21Q9BQT8 299 aaPredicted RBP19.38■□□□□ 0.69
USP48-214ENST00000532737 E7EUB6 86 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 PLA2G10O15496 165 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 OR5AC1P0C628 307 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 PF4V1P10720 104 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 UCP1P25874 307 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 CD40LGP29965 261 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 RPL23AP62750 156 aaKnown RBP19.37■□□□□ 0.69
USP48-214ENST00000532737 C18orf65Q6ZTR6 163 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms