RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 MS4A7Q9GZW8 240 aaPredicted RBP16.57■□□□□ 0.24
SMCO4-203ENST00000526869 FBXL17Q9UF56 701 aa16.57■□□□□ 0.24
SMCO4-203ENST00000526869 FAM24AA6NFZ4 105 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 SRRM4A7MD48 611 aaKnown RBP16.56■□□□□ 0.24
SMCO4-203ENST00000526869 CFDP00746 253 aaPredicted RBP16.56■□□□□ 0.24
SMCO4-203ENST00000526869 TPT1P13693 172 aaKnown RBP16.56■□□□□ 0.24
SMCO4-203ENST00000526869 EXOSC2Q13868 293 aaKnown RBP16.56■□□□□ 0.24
SMCO4-203ENST00000526869 HABP2Q14520 560 aaPredicted RBP16.56■□□□□ 0.24
SMCO4-203ENST00000526869 CCDC144NLQ6NUI1 221 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 MOB3BQ86TA1 216 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 FKBP11Q9NYL4 201 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 PSENENQ9NZ42 101 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 UBQLN2Q9UHD9 624 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 ITGB1BP2Q9UKP3 347 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 ZNF257Q9Y2Q1 563 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 ARHGAP32A7KAX9 2087 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 CELSR2Q9HCU4 2923 aa16.56■□□□□ 0.24
SMCO4-203ENST00000526869 A0A096LNT2 108 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 TRAV3A0A0B4J244 114 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 SCAF4O95104 1147 aaKnown RBP16.55■□□□□ 0.24
SMCO4-203ENST00000526869 SAA1P0DJI8 122 aaPredicted RBP16.55■□□□□ 0.24
SMCO4-203ENST00000526869 IAPPP10997 89 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 CD1BP29016 333 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 OR2B8PP59922 312 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 RPS16P62249 146 aaKnown RBP16.55■□□□□ 0.24
SMCO4-203ENST00000526869 LDLRAD2Q5SZI1 272 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 STX12Q86Y82 276 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 TMEM167AQ8TBQ9 72 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 DTD1Q8TEA8 209 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 LPAR2Q9HBW0 351 aa16.55■□□□□ 0.24
SMCO4-203ENST00000526869 CEBPZOSA8MTT3 80 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 B4DSR2 109 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 JTBO76095 146 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 KBTBD11O94819 623 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 SPDEFO95238 335 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 IFNA17P01571 189 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 IGLV2-23P01705 113 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 MSMBP08118 114 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 SULT1A1P50225 295 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 HSPE1P61604 102 aaKnown RBP16.54■□□□□ 0.24
SMCO4-203ENST00000526869 VMA21Q3ZAQ7 101 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 PRSS57Q6UWY2 283 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 STPG2Q8N412 459 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 SCARB1Q8WTV0 552 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 CLCC1Q96S66 551 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 TSNAXQ99598 290 aaKnown RBP16.54■□□□□ 0.24
SMCO4-203ENST00000526869 ABCA2Q9BZC7 2435 aa16.54■□□□□ 0.24
SMCO4-203ENST00000526869 TRAV20A0A0B4J274 112 aa16.53■□□□□ 0.24
SMCO4-203ENST00000526869 GATA3P23771 443 aa16.53■□□□□ 0.24
SMCO4-203ENST00000526869 LGALS4P56470 323 aa16.53■□□□□ 0.24
SMCO4-203ENST00000526869 NHLH2Q02577 135 aa16.53■□□□□ 0.24
SMCO4-203ENST00000526869 LOXL1Q08397 574 aaPredicted RBP16.53■□□□□ 0.24
SMCO4-203ENST00000526869 CFHR4Q92496 578 aa16.53■□□□□ 0.24
SMCO4-203ENST00000526869 NUP50Q9UKX7 468 aa16.53■□□□□ 0.24
SMCO4-203ENST00000526869 TCF19Q9Y242 345 aa16.53■□□□□ 0.24
SMCO4-203ENST00000526869 DOPEY2Q9Y3R5 2298 aa16.52■□□□□ 0.24
SMCO4-203ENST00000526869 BORCS7-ASMTA0A0B4J1R7 106 aa16.52■□□□□ 0.24
SMCO4-203ENST00000526869 TMEM14EPQ6UXP3 125 aa16.52■□□□□ 0.24
SMCO4-203ENST00000526869 BAP18Q8IXM2 172 aa16.52■□□□□ 0.24
SMCO4-203ENST00000526869 TEX45Q8NA69 505 aa16.52■□□□□ 0.24
SMCO4-203ENST00000526869 UBAC2Q8NBM4 344 aa16.52■□□□□ 0.24
SMCO4-203ENST00000526869 OR5B3Q8NH48 314 aa16.52■□□□□ 0.24
SMCO4-203ENST00000526869 ABCA12Q86UK0 2595 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 NAV2Q8IVL1 2488 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 TIMM23O14925 209 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 VDAC2P45880 294 aaPredicted RBP16.51■□□□□ 0.23
SMCO4-203ENST00000526869 NDUFA5Q16718 116 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 RPL7L1Q6DKI1 246 aaKnown RBP16.51■□□□□ 0.23
SMCO4-203ENST00000526869 LHFPL4Q7Z7J7 247 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 OR1S2Q8NGQ3 325 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 ZDHHC16Q969W1 377 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 MALSU1Q96EH3 234 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 BSCL2Q96G97 398 aaPredicted RBP16.51■□□□□ 0.23
SMCO4-203ENST00000526869 ARV1Q9H2C2 271 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 STRAPQ9Y3F4 350 aaKnown RBP16.51■□□□□ 0.23
SMCO4-203ENST00000526869 OR51B2Q9Y5P1 312 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 UNC79Q9P2D8 2635 aa16.51■□□□□ 0.23
SMCO4-203ENST00000526869 APCP25054 2843 aa16.5■□□□□ 0.23
SMCO4-203ENST00000526869 IGHV3-72A0A0B4J1Y9 119 aa16.5■□□□□ 0.23
SMCO4-203ENST00000526869 H3BP45 60 aa16.5■□□□□ 0.23
SMCO4-203ENST00000526869 VENTXO95231 258 aa16.5■□□□□ 0.23
SMCO4-203ENST00000526869 RPL8P62917 257 aaKnown RBP16.5■□□□□ 0.23
SMCO4-203ENST00000526869 RPP30P78346 268 aaKnown RBP16.5■□□□□ 0.23
SMCO4-203ENST00000526869 ZNF266Q14584 549 aa16.5■□□□□ 0.23
SMCO4-203ENST00000526869 SMIM3Q9BZL3 60 aa16.5■□□□□ 0.23
SMCO4-203ENST00000526869 HIPK2Q9H2X6 1198 aa16.5■□□□□ 0.23
SMCO4-203ENST00000526869 DFFBO76075 338 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 CST7O76096 145 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 CRYGBP07316 175 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 DYNLT3P51808 116 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 HBG1P69891 147 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 HBG2P69892 147 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 PRCDQ00LT1 54 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 SPANXN5Q5MJ07 72 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 Q5PR19 223 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 EIF5AL1Q6IS14 154 aaKnown RBP16.49■□□□□ 0.23
SMCO4-203ENST00000526869 ALKAL2Q6UX46 152 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 LINC01356Q8N9X3 169 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 OR5C1Q8NGR4 320 aa16.49■□□□□ 0.23
SMCO4-203ENST00000526869 OR4C12Q96R67 309 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms