RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 NPBQ8NG41 125 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 GPR146Q96CH1 333 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 RBM14Q96PK6 669 aaKnown RBP12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 TNFRSF19Q9NS68 423 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 BET1LQ9NYM9 111 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 VPREB3Q9UKI3 123 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 MOB4Q9Y3A3 225 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 NAV3Q8IVL0 2385 aa12.65□□□□□ -0.38
TSPAN4-213ENST00000524895 RBMXL2O75526 392 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 SNAPC5O75971 98 aa12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 NDUFA3O95167 84 aa12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 IAH1Q2TAA2 248 aaPredicted RBP12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 TEX45Q8NA69 505 aa12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 OR4A5Q8NH83 315 aa12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 ZNF418Q8TF45 676 aaPredicted RBP12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 PDCD10Q9BUL8 212 aa12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 RANBP3Q9H6Z4 567 aaPredicted RBP12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 CACNG5Q9UF02 275 aa12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 POMT1Q9Y6A1 747 aa12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 F8P00451 2351 aa12.64□□□□□ -0.39
TSPAN4-213ENST00000524895 A0A1B0GU03 582 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 HMX3A6NHT5 357 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 MPTX1A8MV57 137 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 UPK2O00526 184 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 CRLF1O75462 422 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 SIX6O95475 246 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 OR9G9P0C7N8 305 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 FAM157CP0CG43 387 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 HLA-GP17693 338 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 OR2B8PP59922 312 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 SMCO1Q147U7 214 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 C5orf64Q2M2E5 130 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 C16orf82Q7Z2V1 217 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 TMEM86BQ8N661 226 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 OR11H7Q8NGC8 314 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 OR1S1Q8NH92 325 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 TMEM167AQ8TBQ9 72 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 OR10C1Q96KK4 312 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 RASL11BQ9BPW5 248 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 TPSG1Q9NRR2 321 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 PLSCR3Q9NRY6 295 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 NSG2Q9Y328 171 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 SIGLEC9Q9Y336 463 aa12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 NSD1Q96L73 2696 aaPredicted RBP12.63□□□□□ -0.39
TSPAN4-213ENST00000524895 TRAV3A0A0B4J244 114 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 FGF16O43320 207 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 CRYGBP07316 175 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 SLC25A6P12236 298 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 CXCL3P19876 107 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 BCAP31P51572 246 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 RPL8P62917 257 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 RELBQ01201 579 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 PPP1R27Q86WC6 154 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 MMD2Q8IY49 270 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 Q8N9W7 124 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 CLCC1Q96S66 551 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 ZNF430Q9H8G1 570 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 PRNDQ9UKY0 176 aa12.62□□□□□ -0.39
TSPAN4-213ENST00000524895 DNAJC9-AS1A6NH13 148 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 C15orf61A6NNL5 157 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 M0QZK8 103 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 CHST1O43916 411 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 IL6RP08887 468 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 TRAPPC2P0DI81 140 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 TRAPPC2BP0DI82 140 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 H2BFSP57053 126 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 GNB1P62873 340 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 PRSS8Q16651 343 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 Q6ZRM9 215 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 FOXRED2Q8IWF2 684 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 C5orf56Q8N8D9 126 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 ZBTB8BQ8NAP8 495 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 C2orf50Q96LR7 162 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 DUX5Q96PT3 197 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 CHIAQ9BZP6 476 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 COA4Q9NYJ1 87 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 GSKIPQ9P0R6 139 aa12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 ANK3Q12955 4377 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-213ENST00000524895 ACTL6BO94805 426 aa12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 CA2P00918 260 aa12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 TNXAQ16473 311 aa12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 ZNF436Q9C0F3 470 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 COMMD5Q9GZQ3 224 aa12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 FKBP11Q9NYL4 201 aa12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 FOXA2Q9Y261 457 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 OR51B2Q9Y5P1 312 aa12.6□□□□□ -0.39
TSPAN4-213ENST00000524895 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
TSPAN4-213ENST00000524895 NXPH3O95157 252 aa12.59□□□□□ -0.39
TSPAN4-213ENST00000524895 SCGB1D2O95969 90 aa12.59□□□□□ -0.39
TSPAN4-213ENST00000524895 HLA-DRB1P01911 266 aa12.59□□□□□ -0.39
TSPAN4-213ENST00000524895 FGF2P09038 288 aa12.59□□□□□ -0.39
TSPAN4-213ENST00000524895 MAS1LP35410 378 aa12.59□□□□□ -0.39
TSPAN4-213ENST00000524895 CYCSP99999 105 aaKnown RBP12.59□□□□□ -0.39
TSPAN4-213ENST00000524895 CD83Q01151 205 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms