RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SLC35G3Q8N808 338 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 MITD1Q8WV92 249 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 OR2A7Q96R45 310 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 ESM1Q9NQ30 184 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 PLSCR3Q9NRY6 295 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 BET1LQ9NYM9 111 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 SIGLEC9Q9Y336 463 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 MMP24Q9Y5R2 645 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 SNAPC5O75971 98 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 IFNA21P01568 189 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 IGKV1-39P01597 117 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 IGKV1D-39P04432 117 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 FGF2P09038 288 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 VDAC1P21796 283 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 F2RL1P55085 397 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 FBLN7Q53RD9 439 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 MMD2Q8IY49 270 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 VKORC1L1Q8N0U8 176 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 PUSL1Q8N0Z8 303 aaKnown RBP11.26□□□□□ -0.61
SDC2-203ENST00000519587 C12orf45Q8N5I9 185 aaPredicted RBP11.26□□□□□ -0.61
SDC2-203ENST00000519587 Q8N9W7 124 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 OR52B4Q8NGK2 314 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 LHFPL5Q8TAF8 219 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 TMEM167AQ8TBQ9 72 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 LSM10Q969L4 123 aaKnown RBP11.26□□□□□ -0.61
SDC2-203ENST00000519587 SEC22AQ96IW7 307 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 RITA1Q96K30 269 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 SPIN2AQ99865 258 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 SPIN2BQ9BPZ2 258 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 RANBP3Q9H6Z4 567 aaPredicted RBP11.26□□□□□ -0.61
SDC2-203ENST00000519587 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 TMED3Q9Y3Q3 217 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 SVEP1Q4LDE5 3571 aa11.26□□□□□ -0.61
SDC2-203ENST00000519587 C7orf66A4D0T2 115 aa11.25□□□□□ -0.61
SDC2-203ENST00000519587 SRRM4A7MD48 611 aaKnown RBP11.25□□□□□ -0.61
SDC2-203ENST00000519587 KCNAB3O43448 404 aa11.25□□□□□ -0.61
SDC2-203ENST00000519587 RBMXL2O75526 392 aaKnown RBP11.25□□□□□ -0.61
SDC2-203ENST00000519587 HLA-DRB1P01911 266 aa11.25□□□□□ -0.61
SDC2-203ENST00000519587 MAS1LP35410 378 aa11.25□□□□□ -0.61
SDC2-203ENST00000519587 RPL8P62917 257 aaKnown RBP11.25□□□□□ -0.61
SDC2-203ENST00000519587 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
SDC2-203ENST00000519587 THOC7Q6I9Y2 204 aaKnown RBP11.25□□□□□ -0.61
SDC2-203ENST00000519587 LIN54Q6MZP7 749 aa11.25□□□□□ -0.61
SDC2-203ENST00000519587 PRSS22Q9GZN4 317 aa11.25□□□□□ -0.61
SDC2-203ENST00000519587 CACFD1Q9UGQ2 172 aa11.25□□□□□ -0.61
SDC2-203ENST00000519587 PRNDQ9UKY0 176 aa11.25□□□□□ -0.61
SDC2-203ENST00000519587 UPK2O00526 184 aa11.24□□□□□ -0.61
SDC2-203ENST00000519587 SSNA1O43805 119 aa11.24□□□□□ -0.61
SDC2-203ENST00000519587 IGKV1-5P01602 117 aa11.24□□□□□ -0.61
SDC2-203ENST00000519587 PRSS8Q16651 343 aa11.24□□□□□ -0.61
SDC2-203ENST00000519587 LYZL2Q7Z4W2 148 aa11.24□□□□□ -0.61
SDC2-203ENST00000519587 UXS1Q8NBZ7 420 aa11.24□□□□□ -0.61
SDC2-203ENST00000519587 OR4A16Q8NH70 328 aa11.24□□□□□ -0.61
SDC2-203ENST00000519587 RBMXL1Q96E39 390 aaKnown RBP11.24□□□□□ -0.61
SDC2-203ENST00000519587 ZNF430Q9H8G1 570 aaPredicted RBP11.24□□□□□ -0.61
SDC2-203ENST00000519587 FKBP11Q9NYL4 201 aa11.24□□□□□ -0.61
SDC2-203ENST00000519587 ALG5Q9Y673 324 aa11.24□□□□□ -0.61
SDC2-203ENST00000519587 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 CNIH1O95406 144 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 CRYGBP07316 175 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 HOXB5P09067 269 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 SULT1A3P0DMM9 295 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 SULT1A4P0DMN0 295 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 HLA-GP17693 338 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 GNB1P62873 340 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 NMSQ5H8A3 153 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 C9orf152Q5JTZ5 239 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 FOXRED2Q8IWF2 684 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 ABHD5Q8WTS1 349 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 PDCD10Q9BUL8 212 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 COMMD5Q9GZQ3 224 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 OR51J1Q9H342 316 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 TPSG1Q9NRR2 321 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 ANK3Q12955 4377 aaKnown RBP11.23□□□□□ -0.61
SDC2-203ENST00000519587 TNCP24821 2201 aa11.23□□□□□ -0.61
SDC2-203ENST00000519587 A0A0B4J293 547 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 A0A1B0GU03 582 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 C15orf61A6NNL5 157 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 CA2P00918 260 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 AMY1AP04745 511 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 P0C879 139 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 SLC25A6P12236 298 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 SMCO1Q147U7 214 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 TNXAQ16473 311 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 SLC35E3Q7Z769 313 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 MRPL41Q8IXM3 137 aaKnown RBP11.22□□□□□ -0.61
SDC2-203ENST00000519587 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 CLCC1Q96S66 551 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.22□□□□□ -0.61
SDC2-203ENST00000519587 COA4Q9NYJ1 87 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 CACNG5Q9UF02 275 aa11.22□□□□□ -0.61
SDC2-203ENST00000519587 FOXA2Q9Y261 457 aaPredicted RBP11.22□□□□□ -0.61
SDC2-203ENST00000519587 DBX1A6NMT0 343 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 OR9G9P0C7N8 305 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 COMPP49747 757 aaPredicted RBP11.21□□□□□ -0.61
SDC2-203ENST00000519587 OR2B8PP59922 312 aa11.21□□□□□ -0.61
SDC2-203ENST00000519587 RELBQ01201 579 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms