RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TRNT1Q96Q11 434 aaKnown RBP2.06□□□□□ -2.08
CPNE3-204ENST00000517862 OR4K3Q96R72 315 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 NRIP2Q9BQI9 281 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 PYGO2Q9BRQ0 406 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 OR2J1Q9GZK6 312 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 SYT4Q9H2B2 425 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 PLEKHA1Q9HB21 404 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 OR2S2Q9NQN1 319 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 DAZ3Q9NR90 486 aaKnown RBP2.06□□□□□ -2.08
CPNE3-204ENST00000517862 TMEM100Q9NV29 134 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 HILPDAQ9Y5L2 63 aa2.06□□□□□ -2.08
CPNE3-204ENST00000517862 A0A0A6YYD5 115 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 PLAC8L1A1L4L8 177 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 A6NDN8 102 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 H0YJW9 148 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 SCN2BO60939 215 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 UBL3O95164 117 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 GABARAPO95166 117 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 RAB3DO95716 219 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 SNAP29O95721 258 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 TPM3P06753 285 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 CRYGAP11844 174 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 PRPS2P11908 318 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 RAB3BP20337 219 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 PSMB8P28062 276 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 GNRHRP30968 328 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 PFN2P35080 140 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 CXCL5P42830 114 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 MAGEA6P43360 314 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 KCNJ3P48549 501 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 XKP51811 444 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 CRISP3P54108 245 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 CDKN2DP55273 166 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 AP1S2P56377 157 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 DSCR10P59022 87 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 LINC00315P59091 139 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 TPM4P67936 248 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 USF2Q15853 346 aaPredicted RBP2.05□□□□□ -2.08
CPNE3-204ENST00000517862 ZCWPW2Q504Y3 356 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 SPIN3Q5JUX0 258 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 ACTL10Q5JWF8 245 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 SLC25A30Q5SVS4 291 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 HES5Q5TA89 166 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 NOXRED1Q6NXP6 359 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 Q6ZR03 302 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 AHSA2Q719I0 299 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 CYP4Z1Q86W10 505 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 MKXQ8IYA7 352 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 OR11H7Q8NGC8 314 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 SUN5Q8TC36 379 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 TMEM239Q8WW34 195 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.05□□□□□ -2.08
CPNE3-204ENST00000517862 C20orf144Q9BQM9 153 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 COPS4Q9BT78 406 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 SLC25A2Q9BXI2 301 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 LINC00470Q9BZP3 86 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 IFT46Q9NQC8 304 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 MAT2BQ9NZL9 334 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 ZNF225Q9UK10 706 aa2.05□□□□□ -2.08
CPNE3-204ENST00000517862 TBL2Q9Y4P3 447 aaKnown RBP2.05□□□□□ -2.08
CPNE3-204ENST00000517862 RPL36A-HNRNPH2H7BZ11 118 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 M0QXV9 152 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 YEATS4O95619 227 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 CALB1P05937 261 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 GLAP06280 429 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 GFAPP14136 432 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 RCC1P18754 421 aaPredicted RBP2.04□□□□□ -2.08
CPNE3-204ENST00000517862 NMUP48645 174 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 SRP9P49458 86 aaKnown RBP2.04□□□□□ -2.08
CPNE3-204ENST00000517862 P2RX1P51575 399 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 OR2B8PP59922 312 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 H3F3AP84243 136 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 NDPQ00604 133 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 APOFQ13790 326 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 COTL1Q14019 142 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 PDK2Q15119 407 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 QPRTQ15274 297 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 OR1Q1Q15612 314 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 TOMM34Q15785 309 aaPredicted RBP2.04□□□□□ -2.08
CPNE3-204ENST00000517862 TMEM183BQ1AE95 376 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 LDLRAD2Q5SZI1 272 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
CPNE3-204ENST00000517862 TMEM183AQ8IXX5 376 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 BOD1L2Q8IYS8 172 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 RNF175Q8N4F7 328 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 COX18Q8N8Q8 333 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 OR11L1Q8NGX0 322 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 MYOZ3Q8TDC0 251 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 GTF2H4Q92759 462 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 ITFG2Q969R8 447 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 FLYWCH2Q96CP2 140 aaKnown RBP2.04□□□□□ -2.08
CPNE3-204ENST00000517862 FAM210BQ96KR6 192 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 ARV1Q9H2C2 271 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 WFDC1Q9HC57 220 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 SDHAF2Q9NX18 166 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 ZNF586Q9NXT0 402 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 CYB5R1Q9UHQ9 305 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 ZNF257Q9Y2Q1 563 aa2.04□□□□□ -2.08
CPNE3-204ENST00000517862 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
CPNE3-204ENST00000517862 TRAV38-1A0A0B4J264 116 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms