RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 SCGB1D2O95969 90 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 IGLV2-23P01705 113 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 PVALBP20472 110 aaPredicted RBP7.13□□□□□ -1.27
CAST-244ENST00000515663 EPHA1P21709 976 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 USF1P22415 310 aaPredicted RBP7.13□□□□□ -1.27
CAST-244ENST00000515663 COX7A1P24310 79 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 RPL12P30050 165 aaKnown RBP7.13□□□□□ -1.27
CAST-244ENST00000515663 CEACAM3P40198 252 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 LGALS7P47929 136 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 UBE2E1P51965 193 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 ERVK-16P61578 105 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 LOXL1Q08397 574 aaPredicted RBP7.13□□□□□ -1.27
CAST-244ENST00000515663 OR4A47Q6IF82 309 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 OR2C3Q8N628 320 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 CFHR4Q92496 578 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 FLYWCH2Q96CP2 140 aaKnown RBP7.13□□□□□ -1.27
CAST-244ENST00000515663 LYRM2Q9NU23 88 aaPredicted RBP7.13□□□□□ -1.27
CAST-244ENST00000515663 TMEM14BQ9NUH8 114 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 TMEM140Q9NV12 185 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 FOXA2Q9Y261 457 aaPredicted RBP7.13□□□□□ -1.27
CAST-244ENST00000515663 TBL2Q9Y4P3 447 aaKnown RBP7.13□□□□□ -1.27
CAST-244ENST00000515663 USF3Q68DE3 2245 aa7.13□□□□□ -1.27
CAST-244ENST00000515663 C15orf61A6NNL5 157 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 UPK2O00526 184 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 KCNAB3O43448 404 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 MED6O75586 246 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 ARG1P05089 322 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 CRYGBP07316 175 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 FOSL1P15407 271 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 CD1BP29016 333 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 REG1BP48304 166 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 SPCS3P61009 180 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 UBE2KP61086 200 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 BTN1A1Q13410 526 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
CAST-244ENST00000515663 TREML4Q6UXN2 200 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 HSD17B13Q7Z5P4 300 aaPredicted RBP7.12□□□□□ -1.27
CAST-244ENST00000515663 KRTAP1-3Q8IUG1 177 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 VKORC1L1Q8N0U8 176 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 EIF4E3Q8N5X7 224 aaKnown RBP7.12□□□□□ -1.27
CAST-244ENST00000515663 TMEM252Q8N6L7 170 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 OR4A5Q8NH83 315 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 STOML3Q8TAV4 291 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 RPEQ96AT9 228 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 AJUBAQ96IF1 538 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 LINC00052Q96N35 136 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 ZNF257Q9Y2Q1 563 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 MAST4O15021 2626 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 TENM4Q6N022 2769 aa7.12□□□□□ -1.27
CAST-244ENST00000515663 TRAV3A0A0B4J244 114 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 TRAV20A0A0B4J274 112 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 KANTRA0A1W2PQU2 76 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 B4DSR2 109 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 SSSCA1O60232 199 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 KBTBD11O94819 623 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 CFDP00746 253 aaPredicted RBP7.11□□□□□ -1.27
CAST-244ENST00000515663 MSMBP08118 114 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 GATA3P23771 443 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 HSPE1P61604 102 aaKnown RBP7.11□□□□□ -1.27
CAST-244ENST00000515663 RPL23AP62750 156 aaKnown RBP7.11□□□□□ -1.27
CAST-244ENST00000515663 EWSR1Q01844 656 aaKnown RBP eCLIP7.11□□□□□ -1.27
CAST-244ENST00000515663 PRB3Q04118 309 aaPredicted RBP7.11□□□□□ -1.27
CAST-244ENST00000515663 KLRD1Q13241 179 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 EBI3Q14213 229 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 STPG2Q8N412 459 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 CLRN3Q8NCR9 226 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 VSTM2AQ8TAG5 236 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 TMEM167AQ8TBQ9 72 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 MALSU1Q96EH3 234 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 MS4A7Q9GZW8 240 aaPredicted RBP7.11□□□□□ -1.27
CAST-244ENST00000515663 SLC25A31Q9H0C2 315 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 MAGT1Q9H0U3 335 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 RBKSQ9H477 322 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 LPAR2Q9HBW0 351 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 PRNDQ9UKY0 176 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 COL12A1Q99715 3063 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 NAV2Q8IVL1 2488 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 CENPVL3A0A0U1RRI6 287 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 IGSF23A1L1A6 192 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 FAM24AA6NFZ4 105 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 PCP4L1A6NKN8 68 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 INS-IGF2F8WCM5 200 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 H7C2Y5 167 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 WRBO00258 174 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 H2AFB1P0C5Y9 115 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 SAA1P0DJI8 122 aaPredicted RBP7.11□□□□□ -1.27
CAST-244ENST00000515663 VDAC2P45880 294 aaPredicted RBP7.11□□□□□ -1.27
CAST-244ENST00000515663 VAMP2P63027 116 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 BAXQ07812 192 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 MRGPRG-AS1Q2M3A8 158 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 TMEM14EPQ6UXP3 125 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 SSX9Q7RTT3 188 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 LHFPL4Q7Z7J7 247 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 TEX45Q8NA69 505 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 OR4A16Q8NH70 328 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 PHYHIPLQ96FC7 376 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 HARBI1Q96MB7 349 aa7.11□□□□□ -1.27
CAST-244ENST00000515663 CIB3Q96Q77 187 aaPredicted RBP7.11□□□□□ -1.27
CAST-244ENST00000515663 QTRT1Q9BXR0 403 aaKnown RBP7.11□□□□□ -1.27
CAST-244ENST00000515663 ARV1Q9H2C2 271 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms