RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 TMEM56-RWDD3S4R434 201 aa8.13□□□□□ -1.11
HTT-204ENST00000508321 IGHV7-81A0A0B4J1V7 117 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 CLPSL1A2RUU4 121 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 SRRM4A7MD48 611 aaKnown RBP8.12□□□□□ -1.11
HTT-204ENST00000508321 SFT2D2O95562 160 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 CA2P00918 260 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 HLA-AP01891 365 aaKnown RBP8.12□□□□□ -1.11
HTT-204ENST00000508321 IGF1P05019 195 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 VAMP1P23763 118 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 CRIP2P52943 208 aaPredicted RBP8.12□□□□□ -1.11
HTT-204ENST00000508321 RPL8P62917 257 aaKnown RBP8.12□□□□□ -1.11
HTT-204ENST00000508321 BLCAPP62952 87 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 SUPT4H1P63272 117 aaKnown RBP8.12□□□□□ -1.11
HTT-204ENST00000508321 PPP1R1AQ13522 171 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 PRSS8Q16651 343 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 C9orf152Q5JTZ5 239 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 OR4A47Q6IF82 309 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 ZNF562Q6V9R5 426 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 ZNF695Q8IW36 515 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 LRTM2Q8N967 370 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 RNASE11Q8TAA1 199 aaKnown RBP8.12□□□□□ -1.11
HTT-204ENST00000508321 GLYATL2Q8WU03 294 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 CHPT1Q8WUD6 406 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 ARPC1AQ92747 370 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 RRNAD1Q96FB5 475 aaKnown RBP8.12□□□□□ -1.11
HTT-204ENST00000508321 SEC22AQ96IW7 307 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 TMEM68Q96MH6 324 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 C19orf24Q9BVV8 132 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 OR51J1Q9H342 316 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 PRNDQ9UKY0 176 aa8.12□□□□□ -1.11
HTT-204ENST00000508321 TNCP24821 2201 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 A0A0B4J2A0 478 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 PRAF2O60831 178 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 SNAPC5O75971 98 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 DUS4LO95620 317 aaKnown RBP8.11□□□□□ -1.11
HTT-204ENST00000508321 KRASP01116 189 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 IL6RP08887 468 aaPredicted RBP8.11□□□□□ -1.11
HTT-204ENST00000508321 H2AFB2P0C5Z0 115 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 OR4E1P0C645 316 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 RAB25P57735 213 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 SRSF2Q01130 221 aaKnown RBP8.11□□□□□ -1.11
HTT-204ENST00000508321 DHRS2Q13268 280 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 TMEM187Q14656 261 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 C4orf46Q504U0 113 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 H2BFWTQ7Z2G1 175 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 NRARPQ7Z6K4 114 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 LYG2Q86SG7 212 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 COMMD1Q8N668 190 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 LINC01006Q8NI28 216 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 COQ8AQ8NI60 647 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 LSM10Q969L4 123 aaKnown RBP8.11□□□□□ -1.11
HTT-204ENST00000508321 SRSF8Q9BRL6 282 aaKnown RBP8.11□□□□□ -1.11
HTT-204ENST00000508321 TPSG1Q9NRR2 321 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 FKBP11Q9NYL4 201 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 SHPKQ9UHJ6 478 aa8.11□□□□□ -1.11
HTT-204ENST00000508321 TRAV6A0A075B6T7 132 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 C9orf170A2RU37 121 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 C15orf61A6NNL5 157 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 UPK2O00526 184 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 CNIH1O95406 144 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 IGKV1-39P01597 117 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 IGKV1D-39P04432 117 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 P0C879 139 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 HLA-GP17693 338 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 ANXA7P20073 488 aaKnown RBP8.1□□□□□ -1.11
HTT-204ENST00000508321 VDAC1P21796 283 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 G6PCP35575 357 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 SLC35B1P78383 322 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 CX3CL1P78423 397 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 TMEM267Q0VDI3 215 aaPredicted RBP8.1□□□□□ -1.11
HTT-204ENST00000508321 FXYD3Q14802 87 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 RGS21Q2M5E4 152 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 SP6Q3SY56 376 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 TMEM268Q5VZI3 342 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 SSX9Q7RTT3 188 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 HSD17B13Q7Z5P4 300 aaPredicted RBP8.1□□□□□ -1.11
HTT-204ENST00000508321 ZNF429Q86V71 674 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 MRPL41Q8IXM3 137 aaKnown RBP8.1□□□□□ -1.11
HTT-204ENST00000508321 VKORC1L1Q8N0U8 176 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 STPG2Q8N412 459 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 SGMS2Q8NHU3 365 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 SPATA3Q8NHX4 192 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 PHB2Q99623 299 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 SPIN2AQ99865 258 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 SPIN2BQ9BPZ2 258 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 HSPB9Q9BQS6 159 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 MARVELD1Q9BSK0 173 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 COMMD5Q9GZQ3 224 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 WNT10AQ9GZT5 417 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 ZNF430Q9H8G1 570 aaPredicted RBP8.1□□□□□ -1.11
HTT-204ENST00000508321 GPN1Q9HCN4 374 aaPredicted RBP8.1□□□□□ -1.11
HTT-204ENST00000508321 PARP11Q9NR21 331 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 SERTAD4Q9NUC0 356 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 COA4Q9NYJ1 87 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 FLVCR2Q9UPI3 526 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 ZNF257Q9Y2Q1 563 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 RNF114Q9Y508 228 aa8.1□□□□□ -1.11
HTT-204ENST00000508321 PLXNB1O43157 2135 aa8.09□□□□□ -1.11
HTT-204ENST00000508321 ATP6V0E1O15342 81 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms