RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 SMIM3Q9BZL3 60 aa3.85□□□□□ -1.79
CMSS1-209ENST00000497345 MFFQ9GZY8 342 aa3.85□□□□□ -1.79
CMSS1-209ENST00000497345 OR5AC2Q9NZP5 309 aa3.85□□□□□ -1.79
CMSS1-209ENST00000497345 PRELID3BQ9Y3B1 194 aa3.85□□□□□ -1.79
CMSS1-209ENST00000497345 SOX21Q9Y651 276 aaPredicted RBP3.85□□□□□ -1.79
CMSS1-209ENST00000497345 TMEM56-RWDD3S4R434 201 aa3.85□□□□□ -1.79
CMSS1-209ENST00000497345 POLQO75417 2590 aa3.85□□□□□ -1.79
CMSS1-209ENST00000497345 MED13LQ71F56 2210 aa3.85□□□□□ -1.79
CMSS1-209ENST00000497345 FAM24AA6NFZ4 105 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 CEBPZOSA8MTT3 80 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 VWC2LB2RUY7 222 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 RNASEK-C17orf49H0YIS7 233 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 H3BP45 60 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 BUB1B-PAK6H3BSN5 160 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 K7EPK0 472 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 ST8SIA3O43173 380 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 FOXH1O75593 365 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 MPC2O95563 127 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 APOA2P02652 100 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 RLN2P04090 185 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 OR9G9P0C7N8 305 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 USF1P22415 310 aaPredicted RBP3.84□□□□□ -1.79
CMSS1-209ENST00000497345 NUP62P37198 522 aaPredicted RBP3.84□□□□□ -1.79
CMSS1-209ENST00000497345 RAB13P51153 203 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 CAV2P51636 162 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 ERVK-16P61578 105 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 GNB1P62873 340 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 CYCSP99999 105 aaKnown RBP3.84□□□□□ -1.79
CMSS1-209ENST00000497345 TMEM267Q0VDI3 215 aaPredicted RBP3.84□□□□□ -1.79
CMSS1-209ENST00000497345 EIF4EBP1Q13541 118 aaPredicted RBP3.84□□□□□ -1.79
CMSS1-209ENST00000497345 HES1Q14469 280 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 MSMO1Q15800 293 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 SSX2Q16385 188 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 RTL8BQ17RB0 113 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 LAMTOR1Q6IAA8 161 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 BRD3OSQ6XYD6 125 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 ZNF833PQ6ZTB9 187 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 TMUB2Q71RG4 321 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 FAM71E2Q8N5Q1 922 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 OR10A7Q8NGE5 316 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 OR4A16Q8NH70 328 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 RPEQ96AT9 228 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 BSCL2Q96G97 398 aaPredicted RBP3.84□□□□□ -1.79
CMSS1-209ENST00000497345 RITA1Q96K30 269 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 HYLS1Q96M11 299 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 TBX15Q96SF7 602 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 SPIN2AQ99865 258 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 SPIN2BQ9BPZ2 258 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 NABP2Q9BQ15 211 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 ZNF251Q9BRH9 671 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 AIFM2Q9BRQ8 373 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 RNF126Q9BV68 326 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 QTRT1Q9BXR0 403 aaKnown RBP3.84□□□□□ -1.79
CMSS1-209ENST00000497345 NMES1Q9C002 83 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 TOLLIPQ9H0E2 274 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 ARL6Q9H0F7 186 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 RBKSQ9H477 322 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 HEXA-AS1Q9H8Q6 139 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 LINC00574Q9H8X3 128 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 UNKLQ9H9P5 680 aaKnown RBP3.84□□□□□ -1.79
CMSS1-209ENST00000497345 TMEM140Q9NV12 185 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 TMED3Q9Y3Q3 217 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 MMP24Q9Y5R2 645 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 INSIG2Q9Y5U4 225 aa3.84□□□□□ -1.79
CMSS1-209ENST00000497345 USP9YO00507 2555 aaPredicted RBP3.84□□□□□ -1.8
CMSS1-209ENST00000497345 TENM4Q6N022 2769 aa3.84□□□□□ -1.8
CMSS1-209ENST00000497345 MSGN1A6NI15 193 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 SRRM4A7MD48 611 aaKnown RBP3.83□□□□□ -1.8
CMSS1-209ENST00000497345 LEUTXA8MZ59 168 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 H0YJW9 148 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 M0R1W7 72 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 NDUFS8O00217 210 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 CHST1O43916 411 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 SNAPC5O75971 98 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 ATG12O94817 140 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 FSTL3O95633 263 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 HPRT1P00492 218 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 TGFAP01135 160 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 IFNA17P01571 189 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 GAPDHP04406 335 aaKnown RBP3.83□□□□□ -1.8
CMSS1-209ENST00000497345 IGKV1-16P04430 117 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 APELAP0DMC3 54 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 HLA-GP17693 338 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 VDAC1P21796 283 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 PRTN3P24158 256 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 CNTFRP26992 372 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 HTR1DP28221 377 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 NKX2-1P43699 371 aaPredicted RBP3.83□□□□□ -1.8
CMSS1-209ENST00000497345 DSCR9P59020 149 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 KRTAP10-11P60412 298 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 FGL1Q08830 312 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 OPCMLQ14982 345 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 PLGLAQ15195 96 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 HLA-DRB5Q30154 266 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 TMEM30BQ3MIR4 351 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 NMSQ5H8A3 153 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 TOR2AQ5JU69 321 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 LDLRAD2Q5SZI1 272 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 TPTE2P1Q5T6R2 138 aa3.83□□□□□ -1.8
CMSS1-209ENST00000497345 HCP5Q6MZN7 132 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms