RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SELENOHQ8IZQ5 122 aaKnown RBP17.28■□□□□ 0.36
C9orf3-222ENST00000496567 COQ8AQ8NI60 647 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 LHFPL5Q8TAF8 219 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 TMEM140Q9NV12 185 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 JMJD1CQ15652 2540 aa17.27■□□□□ 0.36
C9orf3-222ENST00000496567 SRSF2Q01130 221 aaKnown RBP17.27■□□□□ 0.35
C9orf3-222ENST00000496567 H2BFWTQ7Z2G1 175 aa17.27■□□□□ 0.35
C9orf3-222ENST00000496567 LRTM2Q8N967 370 aa17.27■□□□□ 0.35
C9orf3-222ENST00000496567 TMEM167AQ8TBQ9 72 aa17.27■□□□□ 0.35
C9orf3-222ENST00000496567 RRNAD1Q96FB5 475 aaKnown RBP17.27■□□□□ 0.35
C9orf3-222ENST00000496567 PRR13Q9NZ81 148 aa17.27■□□□□ 0.35
C9orf3-222ENST00000496567 NF1P21359 2839 aa17.26■□□□□ 0.35
C9orf3-222ENST00000496567 A0A0B4J293 547 aa17.26■□□□□ 0.35
C9orf3-222ENST00000496567 ANKRD55Q3KP44 614 aa17.26■□□□□ 0.35
C9orf3-222ENST00000496567 C9orf152Q5JTZ5 239 aa17.26■□□□□ 0.35
C9orf3-222ENST00000496567 MMD2Q8IY49 270 aa17.26■□□□□ 0.35
C9orf3-222ENST00000496567 RNASE11Q8TAA1 199 aaKnown RBP17.26■□□□□ 0.35
C9orf3-222ENST00000496567 ZNF431Q8TF32 576 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-222ENST00000496567 CLCC1Q96S66 551 aa17.26■□□□□ 0.35
C9orf3-222ENST00000496567 GPN1Q9HCN4 374 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-222ENST00000496567 TPSG1Q9NRR2 321 aa17.26■□□□□ 0.35
C9orf3-222ENST00000496567 A0A0B4J2A0 478 aa17.25■□□□□ 0.35
C9orf3-222ENST00000496567 DUXBA0A1W2PPF3 345 aa17.25■□□□□ 0.35
C9orf3-222ENST00000496567 PRSS8Q16651 343 aa17.25■□□□□ 0.35
C9orf3-222ENST00000496567 FAM219AQ8IW50 185 aa17.25■□□□□ 0.35
C9orf3-222ENST00000496567 OR52B4Q8NGK2 314 aa17.25■□□□□ 0.35
C9orf3-222ENST00000496567 PHB2Q99623 299 aa17.25■□□□□ 0.35
C9orf3-222ENST00000496567 SEC22CQ9BRL7 303 aa17.25■□□□□ 0.35
C9orf3-222ENST00000496567 SHPKQ9UHJ6 478 aa17.25■□□□□ 0.35
C9orf3-222ENST00000496567 MMP24Q9Y5R2 645 aa17.25■□□□□ 0.35
C9orf3-222ENST00000496567 SH2D7A6NKC9 451 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-222ENST00000496567 FCN1O00602 326 aa17.24■□□□□ 0.35
C9orf3-222ENST00000496567 TSPAN9O75954 239 aa17.24■□□□□ 0.35
C9orf3-222ENST00000496567 IGKV1-5P01602 117 aa17.24■□□□□ 0.35
C9orf3-222ENST00000496567 IL6RP08887 468 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-222ENST00000496567 FGF2P09038 288 aa17.24■□□□□ 0.35
C9orf3-222ENST00000496567 ZNF562Q6V9R5 426 aa17.24■□□□□ 0.35
C9orf3-222ENST00000496567 Q6ZSV7 163 aa17.24■□□□□ 0.35
C9orf3-222ENST00000496567 SLC35G3Q8N808 338 aa17.24■□□□□ 0.35
C9orf3-222ENST00000496567 MITD1Q8WV92 249 aa17.24■□□□□ 0.35
C9orf3-222ENST00000496567 LSM10Q969L4 123 aaKnown RBP17.24■□□□□ 0.35
C9orf3-222ENST00000496567 ZNF430Q9H8G1 570 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-222ENST00000496567 ZNF702PQ9H963 129 aa17.24■□□□□ 0.35
C9orf3-222ENST00000496567 UPK2O00526 184 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 KCNAB3O43448 404 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 SNAPC5O75971 98 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 ACTL6BO94805 426 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 NDUFA7O95182 113 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 CA2P00918 260 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 IGHG2P01859 326 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 VDAC1P21796 283 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 PJVKQ0ZLH3 352 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 TATDN3Q17R31 274 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 ARSJQ5FYB0 599 aaPredicted RBP17.23■□□□□ 0.35
C9orf3-222ENST00000496567 Q8N2B8 174 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 MAS1LP35410 378 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 RPL8P62917 257 aaKnown RBP17.23■□□□□ 0.35
C9orf3-222ENST00000496567 CX3CL1P78423 397 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 LYZL2Q7Z4W2 148 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 SLC35E3Q7Z769 313 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 OR2T6Q8NHC8 308 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 HSPB9Q9BQS6 159 aa17.23■□□□□ 0.35
C9orf3-222ENST00000496567 IGHV7-81A0A0B4J1V7 117 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 SNRPGP15A8MWD9 76 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 CNIH1O95406 144 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 P0C879 139 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 RELBQ01201 579 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 TNXAQ16473 311 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 MRGPRG-AS1Q2M3A8 158 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 Q6ZS46 218 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 OR4A16Q8NH70 328 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 C16orf95Q9H693 158 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 TMED3Q9Y3Q3 217 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 ALG5Q9Y673 324 aa17.22■□□□□ 0.35
C9orf3-222ENST00000496567 OR9G9P0C7N8 305 aa17.21■□□□□ 0.35
C9orf3-222ENST00000496567 GNB1P62873 340 aa17.21■□□□□ 0.35
C9orf3-222ENST00000496567 C12orf45Q8N5I9 185 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-222ENST00000496567 OR4F5Q8NH21 305 aa17.21■□□□□ 0.35
C9orf3-222ENST00000496567 OR51J1Q9H342 316 aa17.21■□□□□ 0.35
C9orf3-222ENST00000496567 PRNDQ9UKY0 176 aa17.21■□□□□ 0.35
C9orf3-222ENST00000496567 TRAV3A0A0B4J244 114 aa17.2■□□□□ 0.34
C9orf3-222ENST00000496567 HKR1P10072 659 aa17.2■□□□□ 0.34
C9orf3-222ENST00000496567 HLA-GP17693 338 aa17.2■□□□□ 0.34
C9orf3-222ENST00000496567 FXYD3Q14802 87 aa17.2■□□□□ 0.34
C9orf3-222ENST00000496567 FOXRED2Q8IWF2 684 aa17.2■□□□□ 0.34
C9orf3-222ENST00000496567 FKBP11Q9NYL4 201 aa17.2■□□□□ 0.34
C9orf3-222ENST00000496567 RBMXL2O75526 392 aaKnown RBP17.19■□□□□ 0.34
C9orf3-222ENST00000496567 HOXB5P09067 269 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 VDAC2P45880 294 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-222ENST00000496567 BCAP31P51572 246 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 NMSQ5H8A3 153 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-222ENST00000496567 ARPC1AQ92747 370 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 GPR146Q96CH1 333 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 COMMD5Q9GZQ3 224 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 NSG2Q9Y328 171 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 C2CD3Q4AC94 2353 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 A0A0G2JRQ6 117 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 C15orf61A6NNL5 157 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 AP4M1O00189 453 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms