RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 HIST1H1BP16401 226 aaKnown RBP13.06□□□□□ -0.32
TMEM53-209ENST00000495630 GNB3P16520 340 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 TALDO1P37837 337 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 RPL27AP46776 148 aaKnown RBP13.06□□□□□ -0.32
TMEM53-209ENST00000495630 PLA2G7Q13093 441 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 RBPMS2Q6ZRY4 209 aaKnown RBP13.06□□□□□ -0.32
TMEM53-209ENST00000495630 SLC38A6Q8IZM9 456 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 RPP25LQ8N5L8 163 aaKnown RBP13.06□□□□□ -0.32
TMEM53-209ENST00000495630 OR2C3Q8N628 320 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 ZNF645Q8N7E2 425 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 OR1L6Q8NGR2 347 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 TMEM167AQ8TBQ9 72 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 FYTTD1Q96QD9 318 aaKnown RBP13.06□□□□□ -0.32
TMEM53-209ENST00000495630 OR2A7Q96R45 310 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 MRPL27Q9P0M9 148 aaKnown RBP13.06□□□□□ -0.32
TMEM53-209ENST00000495630 MRPS7Q9Y2R9 242 aaKnown RBP13.06□□□□□ -0.32
TMEM53-209ENST00000495630 E7EUB6 86 aa13.05□□□□□ -0.32
TMEM53-209ENST00000495630 MFNGO00587 321 aa13.05□□□□□ -0.32
TMEM53-209ENST00000495630 KBTBD11O94819 623 aa13.05□□□□□ -0.32
TMEM53-209ENST00000495630 GALP22466 123 aa13.05□□□□□ -0.32
TMEM53-209ENST00000495630 PSMA1P25786 263 aaKnown RBP13.05□□□□□ -0.32
TMEM53-209ENST00000495630 PSMB6P28072 239 aa13.05□□□□□ -0.32
TMEM53-209ENST00000495630 ARFRP1Q13795 201 aa13.05□□□□□ -0.32
TMEM53-209ENST00000495630 LGALS9CQ6DKI2 356 aa13.05□□□□□ -0.32
TMEM53-209ENST00000495630 BTNL8Q6UX41 500 aa13.05□□□□□ -0.32
TMEM53-209ENST00000495630 TMEM217Q8N7C4 229 aa13.05□□□□□ -0.32
TMEM53-209ENST00000495630 KMT2AQ03164 3969 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 KIR2DL5BA0A0G2JN68 375 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 KIR2DL5BA0A0G2JPC4 375 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 RAB27BO00194 218 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 HLA-DQB1P01920 261 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 HIST1H1DP16402 221 aaKnown RBP13.04□□□□□ -0.32
TMEM53-209ENST00000495630 CTRB1P17538 263 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 CALRP27797 417 aaKnown RBP13.04□□□□□ -0.32
TMEM53-209ENST00000495630 ELLP55199 621 aaPredicted RBP13.04□□□□□ -0.32
TMEM53-209ENST00000495630 RPL30P62888 115 aaKnown RBP13.04□□□□□ -0.32
TMEM53-209ENST00000495630 IRF3Q14653 427 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 ZNF585BQ52M93 769 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 CTRB2Q6GPI1 263 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 C19orf35Q6ZS72 473 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 VKORC1L1Q8N0U8 176 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 PUSL1Q8N0Z8 303 aaKnown RBP13.04□□□□□ -0.32
TMEM53-209ENST00000495630 KIR2DL5AQ8N109 375 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 KIR2DL5BQ8NHK3 375 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 RNF183Q96D59 192 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 CXorf58Q96LI9 332 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 C5orf66Q9H5L9 145 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 SCN3BQ9NY72 215 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 RBMX2Q9Y388 322 aaKnown RBP13.04□□□□□ -0.32
TMEM53-209ENST00000495630 OR2W1Q9Y3N9 320 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 S4R3C0 116 aa13.04□□□□□ -0.32
TMEM53-209ENST00000495630 IGKV1D-8A0A087WSZ0 117 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 A0A1B0GW64 132 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 J3QRK9 145 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 CTXN2P0C2S0 81 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 DEFA4P12838 97 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 AREGP15514 252 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 CD36P16671 472 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 RPS25P62851 125 aaKnown RBP13.03□□□□□ -0.32
TMEM53-209ENST00000495630 HES5Q5TA89 166 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 UNQ9165/PRO28630Q6UXU0 137 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 STPG3Q8N7X2 389 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 OR4S2Q8NH73 311 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 SPAG8Q99932 426 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-209ENST00000495630 UFC1Q9Y3C8 167 aa13.03□□□□□ -0.32
TMEM53-209ENST00000495630 A0A075B6Q4 140 aa13.02□□□□□ -0.33
TMEM53-209ENST00000495630 METTL21EPA6NDL7 271 aa13.02□□□□□ -0.33
TMEM53-209ENST00000495630 HSMCR30P0CW71 290 aa13.02□□□□□ -0.33
TMEM53-209ENST00000495630 RAB6AP20340 208 aa13.02□□□□□ -0.33
TMEM53-209ENST00000495630 DTYMKP23919 212 aa13.02□□□□□ -0.33
TMEM53-209ENST00000495630 DEFB135Q30KP9 77 aa13.02□□□□□ -0.33
TMEM53-209ENST00000495630 OR2B11Q5JQS5 317 aa13.02□□□□□ -0.33
TMEM53-209ENST00000495630 PHLDA1Q8WV24 401 aaPredicted RBP13.02□□□□□ -0.33
TMEM53-209ENST00000495630 HSD17B10Q99714 261 aaKnown RBP13.02□□□□□ -0.33
TMEM53-209ENST00000495630 ACOT13Q9NPJ3 140 aa13.02□□□□□ -0.33
TMEM53-209ENST00000495630 IGLV11-55A0A075B6I3 123 aa13.01□□□□□ -0.33
TMEM53-209ENST00000495630 IGLV2-14P01704 120 aa13.01□□□□□ -0.33
TMEM53-209ENST00000495630 MYOD1P15172 320 aa13.01□□□□□ -0.33
TMEM53-209ENST00000495630 FABP5Q01469 135 aa13.01□□□□□ -0.33
TMEM53-209ENST00000495630 ARL6IP1Q15041 203 aa13.01□□□□□ -0.33
TMEM53-209ENST00000495630 HERC2O95714 4834 aa13□□□□□ -0.33
TMEM53-209ENST00000495630 PDCD5O14737 125 aa13□□□□□ -0.33
TMEM53-209ENST00000495630 TSPAN4O14817 238 aa13□□□□□ -0.33
TMEM53-209ENST00000495630 DEDDO75618 318 aa13□□□□□ -0.33
TMEM53-209ENST00000495630 HRASP01112 189 aa13□□□□□ -0.33
TMEM53-209ENST00000495630 NFYAP23511 347 aaPredicted RBP13□□□□□ -0.33
TMEM53-209ENST00000495630 BRWD1-AS2P59051 145 aa13□□□□□ -0.33
TMEM53-209ENST00000495630 RPL8P62917 257 aaKnown RBP13□□□□□ -0.33
TMEM53-209ENST00000495630 MLLT11Q13015 90 aaPredicted RBP13□□□□□ -0.33
TMEM53-209ENST00000495630 PLET1Q6UQ28 207 aa13□□□□□ -0.33
TMEM53-209ENST00000495630 AIFM2Q9BRQ8 373 aa13□□□□□ -0.33
TMEM53-209ENST00000495630 MFSD2BA6NFX1 497 aa12.99□□□□□ -0.33
TMEM53-209ENST00000495630 HLA-GP17693 338 aa12.99□□□□□ -0.33
TMEM53-209ENST00000495630 CRHBPP24387 322 aa12.99□□□□□ -0.33
TMEM53-209ENST00000495630 PTBP1P26599 531 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM53-209ENST00000495630 EIF4EBP1Q13541 118 aaPredicted RBP12.99□□□□□ -0.33
TMEM53-209ENST00000495630 OGFRL1Q5TC84 451 aaPredicted RBP12.99□□□□□ -0.33
TMEM53-209ENST00000495630 LAMTOR1Q6IAA8 161 aa12.99□□□□□ -0.33
TMEM53-209ENST00000495630 ZNF66Q6ZN08 573 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms