RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 H2BFWTQ7Z2G1 175 aa9.92□□□□□ -0.82
SNX17-208ENST00000493711 SELENOHQ8IZQ5 122 aaKnown RBP9.92□□□□□ -0.82
SNX17-208ENST00000493711 C12orf45Q8N5I9 185 aaPredicted RBP9.92□□□□□ -0.82
SNX17-208ENST00000493711 LSM10Q969L4 123 aaKnown RBP9.92□□□□□ -0.82
SNX17-208ENST00000493711 OR2A7Q96R45 310 aa9.92□□□□□ -0.82
SNX17-208ENST00000493711 NPFFR1Q9GZQ6 430 aa9.92□□□□□ -0.82
SNX17-208ENST00000493711 BEX1Q9HBH7 125 aa9.92□□□□□ -0.82
SNX17-208ENST00000493711 PLSCR3Q9NRY6 295 aa9.92□□□□□ -0.82
SNX17-208ENST00000493711 METTL1Q9UBP6 276 aaKnown RBP9.92□□□□□ -0.82
SNX17-208ENST00000493711 TMED3Q9Y3Q3 217 aa9.92□□□□□ -0.82
SNX17-208ENST00000493711 MMP24Q9Y5R2 645 aa9.92□□□□□ -0.82
SNX17-208ENST00000493711 NSD1Q96L73 2696 aaPredicted RBP9.91□□□□□ -0.82
SNX17-208ENST00000493711 C7orf66A4D0T2 115 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 GPR137BO60478 399 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 SNAPC5O75971 98 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 KRASP01116 189 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 IGLV2-23P01705 113 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 CRYBA1P05813 215 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 TATDN3Q17R31 274 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 ANKRD55Q3KP44 614 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 LIN54Q6MZP7 749 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 MMD2Q8IY49 270 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 PUSL1Q8N0Z8 303 aaKnown RBP9.91□□□□□ -0.82
SNX17-208ENST00000493711 FAM71E2Q8N5Q1 922 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 TMEM167AQ8TBQ9 72 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 SEC22AQ96IW7 307 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 CHIAQ9BZP6 476 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 RANBP3Q9H6Z4 567 aaPredicted RBP9.91□□□□□ -0.82
SNX17-208ENST00000493711 FKBP11Q9NYL4 201 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 SIGLEC9Q9Y336 463 aa9.91□□□□□ -0.82
SNX17-208ENST00000493711 COL6A5A8TX70 2615 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 SRRM4A7MD48 611 aaKnown RBP9.9□□□□□ -0.82
SNX17-208ENST00000493711 SLC25A17O43808 307 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 KBTBD11O94819 623 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 IGKV1-39P01597 117 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 HLA-DRB1P01911 266 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 IGKV1D-39P04432 117 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 SAA1P0DJI8 122 aaPredicted RBP9.9□□□□□ -0.82
SNX17-208ENST00000493711 SLC25A6P12236 298 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 G6PCP35575 357 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 F2RL1P55085 397 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 UBA52P62987 128 aaKnown RBP9.9□□□□□ -0.82
SNX17-208ENST00000493711 OR4A47Q6IF82 309 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 PPP1R27Q86WC6 154 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 TMEM219Q86XT9 240 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 C5orf56Q8N8D9 126 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 Q8N9W7 124 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 RITA1Q96K30 269 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 SPIN2AQ99865 258 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 SPIN2BQ9BPZ2 258 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 SEC22CQ9BRL7 303 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 PRSS22Q9GZN4 317 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 TMEM140Q9NV12 185 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 PRNDQ9UKY0 176 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 STAB1Q9NY15 2570 aa9.9□□□□□ -0.82
SNX17-208ENST00000493711 SONP18583 2426 aaKnown RBP9.9□□□□□ -0.83
SNX17-208ENST00000493711 NBEAL1Q6ZS30 2694 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 A0A1B0GU03 582 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 UPK2O00526 184 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 KCNAB3O43448 404 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 ACTL6BO94805 426 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 CRYGBP07316 175 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 IL6RP08887 468 aaPredicted RBP9.89□□□□□ -0.83
SNX17-208ENST00000493711 RPL8P62917 257 aaKnown RBP9.89□□□□□ -0.83
SNX17-208ENST00000493711 PRSS8Q16651 343 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 THOC7Q6I9Y2 204 aaKnown RBP9.89□□□□□ -0.83
SNX17-208ENST00000493711 ZNF562Q6V9R5 426 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 SSX9Q7RTT3 188 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 FOXRED2Q8IWF2 684 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 SLC35G3Q8N808 338 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 OR4A16Q8NH70 328 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 OR51J1Q9H342 316 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 FBXL15Q9H469 300 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 COA4Q9NYJ1 87 aa9.89□□□□□ -0.83
SNX17-208ENST00000493711 DBX1A6NMT0 343 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 SSNA1O43805 119 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 CHST1O43916 411 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 IGKV1-5P01602 117 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 P0C879 139 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 CNTFRP26992 372 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 NMSQ5H8A3 153 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 LYZL2Q7Z4W2 148 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 MRPL41Q8IXM3 137 aaKnown RBP9.88□□□□□ -0.83
SNX17-208ENST00000493711 VKORC1L1Q8N0U8 176 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 OR52B4Q8NGK2 314 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 LHFPL5Q8TAF8 219 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 COMMD5Q9GZQ3 224 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 ESM1Q9NQ30 184 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.88□□□□□ -0.83
SNX17-208ENST00000493711 ALG5Q9Y673 324 aa9.88□□□□□ -0.83
SNX17-208ENST00000493711 RBMXL2O75526 392 aaKnown RBP9.87□□□□□ -0.83
SNX17-208ENST00000493711 CNIH1O95406 144 aa9.87□□□□□ -0.83
SNX17-208ENST00000493711 SULT1A3P0DMM9 295 aa9.87□□□□□ -0.83
SNX17-208ENST00000493711 SULT1A4P0DMN0 295 aa9.87□□□□□ -0.83
SNX17-208ENST00000493711 HLA-GP17693 338 aa9.87□□□□□ -0.83
SNX17-208ENST00000493711 SMCO1Q147U7 214 aa9.87□□□□□ -0.83
SNX17-208ENST00000493711 ARSJQ5FYB0 599 aaPredicted RBP9.87□□□□□ -0.83
SNX17-208ENST00000493711 GGNBP1Q5YKI7 109 aa9.87□□□□□ -0.83
SNX17-208ENST00000493711 ZNF429Q86V71 674 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms