RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 OR4A47Q6IF82 309 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 TREML4Q6UXN2 200 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 TBC1D26Q86UD7 250 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 MMD2Q8IY49 270 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 OR2A7Q96R45 310 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 PRRT1Q99946 306 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 ZFP57Q9NU63 452 aa14.56□□□□□ -0.08
PTCD3-217ENST00000488801 CTSDP07339 412 aaPredicted RBP14.55□□□□□ -0.08
PTCD3-217ENST00000488801 CNPY1Q3B7I2 92 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 SCGB2B2Q4G0G5 96 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 CXorf66Q5JRM2 361 aaPredicted RBP14.55□□□□□ -0.08
PTCD3-217ENST00000488801 LINC00299Q6ZSB3 139 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 LCNL1Q6ZST4 164 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 POC5Q8NA72 575 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 LFNGQ8NES3 379 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 OR51S1Q8NGJ8 323 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 OR4A5Q8NH83 315 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 GRPEL2Q8TAA5 225 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 MARCH1Q8TCQ1 289 aa14.55□□□□□ -0.08
PTCD3-217ENST00000488801 SRSF12Q8WXF0 261 aaKnown RBP14.55□□□□□ -0.08
PTCD3-217ENST00000488801 FOXA2Q9Y261 457 aaPredicted RBP14.55□□□□□ -0.08
PTCD3-217ENST00000488801 A0A1B0GW64 132 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 MPPED1O15442 326 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 BRI3O95415 125 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 PGAM2P15259 253 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 PI3P19957 117 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 SLC6A1P30531 599 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 PIGPP57054 158 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 TMEM267Q0VDI3 215 aaPredicted RBP14.54□□□□□ -0.08
PTCD3-217ENST00000488801 ETV3LQ6ZN32 361 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 C18orf65Q6ZTR6 163 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 GDPD1Q8N9F7 314 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 OR5M8Q8NGP6 311 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 TMEM68Q96MH6 324 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 AIFM2Q9BRQ8 373 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 KLK15Q9H2R5 256 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 C5orf66Q9H5L9 145 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 AKIP1Q9NQ31 210 aa14.54□□□□□ -0.08
PTCD3-217ENST00000488801 A0A1W2PN81 502 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 MARCH11A6NNE9 402 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 H0Y980 276 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 IGKV1-39P01597 117 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 IGKV1D-39P04432 117 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 S100GP29377 79 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 MAS1LP35410 378 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 CHRNA7P36544 502 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 CDX1P47902 265 aaPredicted RBP14.53□□□□□ -0.08
PTCD3-217ENST00000488801 GNB1P62873 340 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 TNXAQ16473 311 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 C10orf55Q5SWW7 151 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 UNQ5815/PRO19632Q6UWF5 114 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 SSX9Q7RTT3 188 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 OR4F17Q8NGA8 305 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 ZFAND1Q8TCF1 268 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 ABHD5Q8WTS1 349 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 R3HDM4Q96D70 268 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 OR4F4Q96R69 305 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 RTBDNQ9BSG5 229 aaPredicted RBP14.53□□□□□ -0.08
PTCD3-217ENST00000488801 HRASLSQ9HDD0 168 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 TMEM140Q9NV12 185 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 GPR132Q9UNW8 380 aa14.53□□□□□ -0.08
PTCD3-217ENST00000488801 A0A1W2PRX2 142 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 TEX22C9J3V5 150 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 CNIH1O95406 144 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 LPAR6P43657 344 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 AP3S2P59780 193 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 BAK1Q16611 211 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 TOMM5Q8N4H5 51 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 ZNF491Q8N8L2 437 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 SEC22AQ96IW7 307 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 BATF3Q9NR55 127 aa14.52□□□□□ -0.09
PTCD3-217ENST00000488801 TRAV3A0A0B4J244 114 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 CGB1A6NKQ9 187 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 E7EUB6 86 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 H3BUA1 57 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 UPK2O00526 184 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 FAUP35544 74 aaKnown RBP14.51□□□□□ -0.09
PTCD3-217ENST00000488801 RAB9AP51151 201 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 RPL8P62917 257 aaKnown RBP14.51□□□□□ -0.09
PTCD3-217ENST00000488801 ZNF45Q02386 682 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 KHDC1LQ5JSQ8 128 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 CCDC71LQ8N9Z2 235 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 UBE2E2Q96LR5 201 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 TP53RKQ96S44 253 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 SCP2D1Q9UJQ7 156 aa14.51□□□□□ -0.09
PTCD3-217ENST00000488801 P0C879 139 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 RPA2P15927 270 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 HLA-GP17693 338 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 UCP1P25874 307 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 RUNX1Q01196 453 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 ZNF695Q8IW36 515 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 ADAD2Q8NCV1 583 aaKnown RBP14.5□□□□□ -0.09
PTCD3-217ENST00000488801 KLHL30-AS1Q8NEE0 82 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 FAM110DQ8TAY7 271 aaPredicted RBP14.5□□□□□ -0.09
PTCD3-217ENST00000488801 C4orf3Q8WVX3 66 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 TMEM230Q96A57 120 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 PTTG2Q9NZH5 202 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 VSIG4Q9Y279 399 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 DNAH3Q8TD57 4116 aa14.5□□□□□ -0.09
PTCD3-217ENST00000488801 MSGN1A6NI15 193 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms