RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 TMEM56-RWDD3S4R434 201 aa11.17□□□□□ -0.62
NUP188-207ENST00000487952 NIPBLQ6KC79 2804 aaeCLIP11.17□□□□□ -0.62
NUP188-207ENST00000487952 SETD2Q9BYW2 2564 aaPredicted RBP11.17□□□□□ -0.62
NUP188-207ENST00000487952 DUXBA0A1W2PPF3 345 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 KCNAB3O43448 404 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 CNIH1O95406 144 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 DUS4LO95620 317 aaKnown RBP11.16□□□□□ -0.62
NUP188-207ENST00000487952 CA2P00918 260 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 AMY1AP04745 511 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 CRYGBP07316 175 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 GNB1P62873 340 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 BLCAPP62952 87 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 OR4A47Q6IF82 309 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 SLC35E3Q7Z769 313 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 SLC35G3Q8N808 338 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 MINDY2Q8NBR6 621 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 OR52B4Q8NGK2 314 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 OR2T6Q8NHC8 308 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 LHFPL5Q8TAF8 219 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 TMEM167AQ8TBQ9 72 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 ZNF431Q8TF32 576 aaPredicted RBP11.16□□□□□ -0.62
NUP188-207ENST00000487952 SEC22AQ96IW7 307 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 PHB2Q99623 299 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 SEC22CQ9BRL7 303 aa11.16□□□□□ -0.62
NUP188-207ENST00000487952 A0A0B4J2A0 478 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 UPK2O00526 184 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 RBMXL2O75526 392 aaKnown RBP11.15□□□□□ -0.62
NUP188-207ENST00000487952 RPL8P62917 257 aaKnown RBP11.15□□□□□ -0.62
NUP188-207ENST00000487952 TNXAQ16473 311 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 PRSS8Q16651 343 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 ANKRD55Q3KP44 614 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 FAM219AQ8IW50 185 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 UXS1Q8NBZ7 420 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 OR4F5Q8NH21 305 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 OR4A16Q8NH70 328 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 ZNF430Q9H8G1 570 aaPredicted RBP11.15□□□□□ -0.62
NUP188-207ENST00000487952 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 PARP11Q9NR21 331 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 SHPKQ9UHJ6 478 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 MMP24Q9Y5R2 645 aa11.15□□□□□ -0.62
NUP188-207ENST00000487952 FCN1O00602 326 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 TSPAN9O75954 239 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 NDUFA7O95182 113 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 IFNA21P01568 189 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 IGKV1-5P01602 117 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 VDAC1P21796 283 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 MAS1LP35410 378 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
NUP188-207ENST00000487952 CX3CL1P78423 397 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 Q6ZSV7 163 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 LYZL2Q7Z4W2 148 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 FOXRED2Q8IWF2 684 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 CADM3Q8N126 398 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 C12orf45Q8N5I9 185 aaPredicted RBP11.14□□□□□ -0.63
NUP188-207ENST00000487952 LRTM2Q8N967 370 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 MITD1Q8WV92 249 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 LSM10Q969L4 123 aaKnown RBP11.14□□□□□ -0.63
NUP188-207ENST00000487952 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
NUP188-207ENST00000487952 C2CD3Q4AC94 2353 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 IGHV7-81A0A0B4J1V7 117 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 SNRPGP15A8MWD9 76 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 IGHG2P01859 326 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 HOXB5P09067 269 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 OR9G9P0C7N8 305 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 HKR1P10072 659 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 HLA-GP17693 338 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 RPL27AP46776 148 aaKnown RBP11.13□□□□□ -0.63
NUP188-207ENST00000487952 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 FXYD3Q14802 87 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 OXA1LQ15070 435 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 THOC7Q6I9Y2 204 aaKnown RBP11.13□□□□□ -0.63
NUP188-207ENST00000487952 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.13□□□□□ -0.63
NUP188-207ENST00000487952 GRPEL2Q8TAA5 225 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 CHPT1Q8WUD6 406 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 ARPC1AQ92747 370 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 COMMD5Q9GZQ3 224 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 OR51J1Q9H342 316 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 FKBP11Q9NYL4 201 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 NSG2Q9Y328 171 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 TMED3Q9Y3Q3 217 aa11.13□□□□□ -0.63
NUP188-207ENST00000487952 TRAV3A0A0B4J244 114 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 A0A0G2JRQ6 117 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 AP4M1O00189 453 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 SULT1A3P0DMM9 295 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 SULT1A4P0DMN0 295 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 OR2B8PP59922 312 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 RELBQ01201 579 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 TATDN3Q17R31 274 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 IZUMO4Q1ZYL8 232 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 Q6ZS46 218 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 Q8N2B8 174 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 TAF15Q92804 592 aaKnown RBP eCLIP11.12□□□□□ -0.63
NUP188-207ENST00000487952 GPR146Q96CH1 333 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 SPIN2AQ99865 258 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 SPIN2BQ9BPZ2 258 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 PDCD10Q9BUL8 212 aa11.12□□□□□ -0.63
NUP188-207ENST00000487952 C16orf95Q9H693 158 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 257.7 ms