RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 ODF3BA8MYP8 253 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 LY6LH3BQJ8 138 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 UPK2O00526 184 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 KCNAB3O43448 404 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 DFFBO76075 338 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 KBTBD11O94819 623 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 NXPH3O95157 252 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 TMEM50AO95807 157 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 IGKV1-16P04430 117 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 IL6RP08887 468 aaPredicted RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 OR9G9P0C7N8 305 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 USF1P22415 310 aaPredicted RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 SULT1A1P50225 295 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 UBE2E1P51965 193 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 PAX9P55771 341 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 LGALS4P56470 323 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 HSPE1P61604 102 aaKnown RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 RPS16P62249 146 aaKnown RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 HBG1P69891 147 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 HBG2P69892 147 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 RELBQ01201 579 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 CLEC12BQ2HXU8 276 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 VMA21Q3ZAQ7 101 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 PDLIM3Q53GG5 364 aaPredicted RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 MOB3BQ86TA1 216 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 PUSL1Q8N0Z8 303 aaKnown RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 UBAC2Q8NBM4 344 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 OR1S2Q8NGQ3 325 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 LRRC20Q8TCA0 184 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 TSNAXQ99598 290 aaKnown RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 QTRT1Q9BXR0 403 aaKnown RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 HIPK2Q9H2X6 1198 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 LPAR2Q9HBW0 351 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 ENY2Q9NPA8 101 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 SIRT7Q9NRC8 400 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 FOXA2Q9Y261 457 aaPredicted RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 ZNF257Q9Y2Q1 563 aa4.99□□□□□ -1.61
VAMP3-203ENST00000487194 STRAPQ9Y3F4 350 aaKnown RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 TBL2Q9Y4P3 447 aaKnown RBP4.99□□□□□ -1.61
VAMP3-203ENST00000487194 DCHS2Q6V1P9 2916 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 IGHV4-30-2A0A087WSY4 118 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 FAM157AC9JC47 383 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 RNASEK-C17orf49H0YIS7 233 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 CST7O76096 145 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 CFDP00746 253 aaPredicted RBP4.98□□□□□ -1.61
VAMP3-203ENST00000487194 SAA1P0DJI8 122 aaPredicted RBP4.98□□□□□ -1.61
VAMP3-203ENST00000487194 IAPPP10997 89 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 HOXB4P17483 251 aaPredicted RBP4.98□□□□□ -1.61
VAMP3-203ENST00000487194 GATA3P23771 443 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 COL8A1P27658 744 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 CD1BP29016 333 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 HTR2BP41595 481 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 ATP5IP56385 69 aaPredicted RBP4.98□□□□□ -1.61
VAMP3-203ENST00000487194 OR2B8PP59922 312 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 RPL8P62917 257 aaKnown RBP4.98□□□□□ -1.61
VAMP3-203ENST00000487194 NHLH2Q02577 135 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 PAX8Q06710 450 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 DIAPH2-AS1Q14236 149 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 ATP6V1FQ16864 119 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 DEFB113Q30KQ7 82 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 CLLU1Q5K131 121 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 SPANXN5Q5MJ07 72 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 RPL7L1Q6DKI1 246 aaKnown RBP4.98□□□□□ -1.61
VAMP3-203ENST00000487194 HCP5Q6MZN7 132 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 ALKAL2Q6UX46 152 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 TMEM14EPQ6UXP3 125 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 MRPL41Q8IXM3 137 aaKnown RBP4.98□□□□□ -1.61
VAMP3-203ENST00000487194 VKORC1L1Q8N0U8 176 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 STPG2Q8N412 459 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 TEX45Q8NA69 505 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 OR5C1Q8NGR4 320 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 OR5B3Q8NH48 314 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 TMEM167AQ8TBQ9 72 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 NRGNQ92686 78 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 MBD6Q96DN6 1003 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 PSMG3-AS1Q96PY0 264 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 SMIM3Q9BZL3 60 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 COMMD5Q9GZQ3 224 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 SLC25A32Q9H2D1 315 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 HEYLQ9NQ87 328 aaPredicted RBP4.98□□□□□ -1.61
VAMP3-203ENST00000487194 TMEM14BQ9NUH8 114 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 OR51B2Q9Y5P1 312 aa4.98□□□□□ -1.61
VAMP3-203ENST00000487194 TRAV3A0A0B4J244 114 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 TRAV20A0A0B4J274 112 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 A0A1W2PN81 502 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 A0A1W2PPI3 338 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 SRRM4A7MD48 611 aaKnown RBP4.97□□□□□ -1.61
VAMP3-203ENST00000487194 B4DSR2 109 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 H3BP45 60 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 IFNA5P01569 189 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 IGLV2-23P01705 113 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 MSMBP08118 114 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 SEC11BP0C7V7 166 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 MAS1LP35410 378 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 CHRNA7P36544 502 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 HOXA1P49639 335 aaPredicted RBP4.97□□□□□ -1.61
VAMP3-203ENST00000487194 DYNLT3P51808 116 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 F2RL1P55085 397 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 DLX1P56177 255 aa4.97□□□□□ -1.61
VAMP3-203ENST00000487194 RAB11AP62491 216 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms