RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	SRSF4	Q08170	494 aa	Known RBP	10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	RBMS2	Q15434	407 aa	Known RBP	10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	TNXA	Q16473	311 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	PRSS8	Q16651	343 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	TRIM16L	Q309B1	348 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	SP6	Q3SY56	376 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	ZNF585B	Q52M93	769 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	MMD2	Q8IY49	270 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	C11orf44	Q8N8P7	122 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	OR4X2	Q8NGF9	303 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	OR4A5	Q8NH83	315 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	GRPEL2	Q8TAA5	225 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	ARPC1A	Q92747	370 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	NAA60	Q9H7X0	242 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	VSIG4	Q9Y279	399 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	WSB1	Q9Y6I7	421 aa		10.9	□□□□□ -0.66
SCAP-211	ENST00000485967	TRAV41	A0A0B4J266	112 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	LYRM1	O43325	122 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	FBXO24	O75426	580 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	ATG12	O94817	140 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	KBTBD11	O94819	623 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	IGF1	P05019	195 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	G6PC	P35575	357 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	KRTAP10-3	P60369	221 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	ECSCR	Q19T08	205 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	OR4A47	Q6IF82	309 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	ZNF329	Q86UD4	541 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	PUSL1	Q8N0Z8	303 aa	Known RBP	10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	ADAD2	Q8NCV1	583 aa	Known RBP	10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	TMEM167A	Q8TBQ9	72 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	TP53RK	Q96S44	253 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	PHB2	Q99623	299 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	BET1L	Q9NYM9	111 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	WNK1	Q9H4A3	2382 aa		10.89	□□□□□ -0.67
SCAP-211	ENST00000485967	CRYM-AS1	A6NIL9	109 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	MARCH11	A6NNE9	402 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967		G3V318	75 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	ARPC1B	O15143	372 aa	Known RBP	10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	PLA2G10	O15496	165 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	SNAPC5	O75971	98 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	CD28	P10747	220 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	MAS1L	P35410	378 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	DHODH	Q02127	395 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	POU2AF1	Q16633	256 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	MZT2B	Q6NZ67	158 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	TEX38	Q6PEX7	206 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	UNQ5815/PRO19632	Q6UWF5	114 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	H2BFWT	Q7Z2G1	175 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	RNASE11	Q8TAA1	199 aa	Known RBP	10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	FAM103A1	Q9BTL3	118 aa	Known RBP	10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	TMEM140	Q9NV12	185 aa		10.88	□□□□□ -0.67
SCAP-211	ENST00000485967	TCRBV4S1A1T	A0A5B7	111 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	MSGN1	A6NI15	193 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	UPK2	O00526	184 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	UPK1B	O75841	260 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	NDUFB6	O95139	128 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	OR5AC1	P0C628	307 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	ANXA3	P12429	323 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	RPL8	P62917	257 aa	Known RBP	10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	NDP	Q00604	133 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	C10orf99	Q6UWK7	81 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	ZNF695	Q8IW36	515 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	CENPS	Q8N2Z9	138 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	COMMD1	Q8N668	190 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	LFNG	Q8NES3	379 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	CITED1	Q99966	193 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	ZNF580	Q9UK33	172 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	FBXO7	Q9Y3I1	522 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	NUBP2	Q9Y5Y2	271 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	PLXNB1	O43157	2135 aa		10.87	□□□□□ -0.67
SCAP-211	ENST00000485967	OPN1MW	P04001	364 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	OPN1MW2	P0DN77	364 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	OPN1MW3	P0DN78	364 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	EGR2	P11161	476 aa	Predicted RBP	10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	HLA-G	P17693	338 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	UCP1	P25874	307 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	RPL27A	P46776	148 aa	Known RBP	10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	AKR1C2	P52895	323 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	MRGPRG-AS1	Q2M3A8	158 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	AKIRIN2	Q53H80	203 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	TMEM128	Q5BJH2	165 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	KHDC1L	Q5JSQ8	128 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	TMEM65	Q6PI78	240 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	SRSF12	Q8WXF0	261 aa	Known RBP	10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	TMEM230	Q96A57	120 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	RRNAD1	Q96FB5	475 aa	Known RBP	10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	TMEM68	Q96MH6	324 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	FYTTD1	Q96QD9	318 aa	Known RBP	10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	TSC22D3	Q99576	134 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	SPIN2A	Q99865	258 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	SPIN2B	Q9BPZ2	258 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	COMMD5	Q9GZQ3	224 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	TMEM222	Q9H0R3	208 aa		10.86	□□□□□ -0.67
SCAP-211	ENST00000485967	TRAV3	A0A0B4J244	114 aa		10.85	□□□□□ -0.67
SCAP-211	ENST00000485967	FAM240B	A0A1B0GVZ2	78 aa		10.85	□□□□□ -0.67
SCAP-211	ENST00000485967		A0A1W2PN81	502 aa		10.85	□□□□□ -0.67
SCAP-211	ENST00000485967	RBMXL2	O75526	392 aa	Known RBP	10.85	□□□□□ -0.67
SCAP-211	ENST00000485967	IGKV1-39	P01597	117 aa		10.85	□□□□□ -0.67
SCAP-211	ENST00000485967	IGKV1D-39	P04432	117 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms