RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TMEM222Q9H0R3 208 aa15.71■□□□□ 0.11
COL6A2-208ENST00000485591 ZNF430Q9H8G1 570 aaPredicted RBP15.71■□□□□ 0.11
COL6A2-208ENST00000485591 TMEM140Q9NV12 185 aa15.71■□□□□ 0.11
COL6A2-208ENST00000485591 HAX1O00165 279 aa15.7■□□□□ 0.1
COL6A2-208ENST00000485591 ATP6V0E1O15342 81 aa15.7■□□□□ 0.1
COL6A2-208ENST00000485591 KRASP01116 189 aa15.7■□□□□ 0.1
COL6A2-208ENST00000485591 IL6RP08887 468 aaPredicted RBP15.7■□□□□ 0.1
COL6A2-208ENST00000485591 SUPT4H1P63272 117 aaKnown RBP15.7■□□□□ 0.1
COL6A2-208ENST00000485591 DHODHQ02127 395 aa15.7■□□□□ 0.1
COL6A2-208ENST00000485591 STPG2Q8N412 459 aa15.7■□□□□ 0.1
COL6A2-208ENST00000485591 WIPF2Q8TF74 440 aaPredicted RBP15.7■□□□□ 0.1
COL6A2-208ENST00000485591 GLYATL2Q8WU03 294 aa15.7■□□□□ 0.1
COL6A2-208ENST00000485591 CHPT1Q8WUD6 406 aa15.7■□□□□ 0.1
COL6A2-208ENST00000485591 PARP11Q9NR21 331 aa15.7■□□□□ 0.1
COL6A2-208ENST00000485591 KCNIP3Q9Y2W7 256 aa15.7■□□□□ 0.1
COL6A2-208ENST00000485591 ARPC1BO15143 372 aaKnown RBP15.69■□□□□ 0.1
COL6A2-208ENST00000485591 FGF2P09038 288 aa15.69■□□□□ 0.1
COL6A2-208ENST00000485591 G6PCP35575 357 aa15.69■□□□□ 0.1
COL6A2-208ENST00000485591 CRIP2P52943 208 aaPredicted RBP15.69■□□□□ 0.1
COL6A2-208ENST00000485591 UBE2MP61081 183 aaKnown RBP15.69■□□□□ 0.1
COL6A2-208ENST00000485591 FXYD3Q14802 87 aa15.69■□□□□ 0.1
COL6A2-208ENST00000485591 TRIM16LQ309B1 348 aa15.69■□□□□ 0.1
COL6A2-208ENST00000485591 SLC25A42Q86VD7 318 aa15.69■□□□□ 0.1
COL6A2-208ENST00000485591 ARPC1AQ92747 370 aa15.69■□□□□ 0.1
COL6A2-208ENST00000485591 SEC22AQ96IW7 307 aa15.69■□□□□ 0.1
COL6A2-208ENST00000485591 NOL4LQ96MY1 436 aaPredicted RBP15.69■□□□□ 0.1
COL6A2-208ENST00000485591 CDS2O95674 445 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 TCRBP04435 133 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 ANXA3P12429 323 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 DEFA1P59665 94 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 DEFA3P59666 94 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 GNB1P62873 340 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 TNXAQ16473 311 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 GON7Q9BXV9 100 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 C20orf85Q9H1P6 137 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 LINC00527Q9UJ94 153 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 FLVCR2Q9UPI3 526 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 FBXO7Q9Y3I1 522 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 TNCP24821 2201 aa15.68■□□□□ 0.1
COL6A2-208ENST00000485591 FAM240BA0A1B0GVZ2 78 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 UPK2O00526 184 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 ATG12O94817 140 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 CNIH1O95406 144 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 MAS1LP35410 378 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 RPL8P62917 257 aaKnown RBP15.67■□□□□ 0.1
COL6A2-208ENST00000485591 TMEM187Q14656 261 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 SGMS2Q8NHU3 365 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 LHFPL5Q8TAF8 219 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 ABHD5Q8WTS1 349 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 COL6A5A8TX70 2615 aa15.67■□□□□ 0.1
COL6A2-208ENST00000485591 PSMB11A5LHX3 300 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 ACTL6BO94805 426 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 EGR2P11161 476 aaPredicted RBP15.66■□□□□ 0.1
COL6A2-208ENST00000485591 VDAC1P21796 283 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 VAMP1P23763 118 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 AKR1C2P52895 323 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 KRTAP10-3P60369 221 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 CFHR3Q02985 330 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 PPP1R1AQ13522 171 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 C19orf54Q5BKX5 351 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 H2BFWTQ7Z2G1 175 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 CENPVQ7Z7K6 275 aaPredicted RBP15.66■□□□□ 0.1
COL6A2-208ENST00000485591 C3orf56Q8N813 242 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 GRPEL2Q8TAA5 225 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 SRSF12Q8WXF0 261 aaKnown RBP15.66■□□□□ 0.1
COL6A2-208ENST00000485591 RBPMSQ93062 196 aaKnown RBP15.66■□□□□ 0.1
COL6A2-208ENST00000485591 IL22RA2Q969J5 263 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 TMEM56Q96MV1 263 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 FAM103A1Q9BTL3 118 aaKnown RBP15.66■□□□□ 0.1
COL6A2-208ENST00000485591 ZNF747Q9BV97 191 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 NUDT15Q9NV35 164 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 TMEM56-RWDD3S4R434 201 aa15.66■□□□□ 0.1
COL6A2-208ENST00000485591 TRAV3A0A0B4J244 114 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 TRAV41A0A0B4J266 112 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 SFT2D2O95562 160 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 IGKV1-5P01602 117 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 P0C879 139 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 HLA-GP17693 338 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 SLC35B1P78383 322 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 SRPXP78539 464 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 TMEM268Q5VZI3 342 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 ZNF695Q8IW36 515 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 SELENOHQ8IZQ5 122 aaKnown RBP15.65■□□□□ 0.1
COL6A2-208ENST00000485591 ENKURQ8TC29 256 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 NUBP2Q9Y5Y2 271 aa15.65■□□□□ 0.1
COL6A2-208ENST00000485591 G3V318 75 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 OR9G9P0C7N8 305 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 ANXA7P20073 488 aaKnown RBP15.64■□□□□ 0.09
COL6A2-208ENST00000485591 TMEM267Q0VDI3 215 aaPredicted RBP15.64■□□□□ 0.09
COL6A2-208ENST00000485591 ECSCRQ19T08 205 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 AKIRIN2Q53H80 203 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 C10orf55Q5SWW7 151 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 TET2Q6N021 2002 aaPredicted RBP15.64■□□□□ 0.09
COL6A2-208ENST00000485591 OR5AU1Q8NGC0 362 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 SPATA3Q8NHX4 192 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 PALMDQ9NP74 551 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 PRR13Q9NZ81 148 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 WSB1Q9Y6I7 421 aa15.64■□□□□ 0.09
COL6A2-208ENST00000485591 TRAV6A0A075B6T7 132 aa15.63■□□□□ 0.09
COL6A2-208ENST00000485591 PIGBOS1A0A0B4J2F0 54 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms