RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RANBP1P43487 201 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 KIR2DS2P43631 304 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 HSPA13P48723 471 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 GABARAPL2P60520 117 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 CBX3Q13185 183 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 EXOSC2Q13868 293 aaKnown RBP5.29□□□□□ -1.56
HDAC3-207ENST00000475549 RPEL1Q2QD12 228 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 SFXN4Q6P4A7 337 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 KCTD9Q7L273 389 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 TPRA1Q86W33 373 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 FAM223AQ8IWN6 122 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 SGPP2Q8IWX5 399 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 Q8N402 240 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 NECAP1Q8NC96 275 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 TMEM167AQ8TBQ9 72 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 LGALS14Q8TCE9 139 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 SLC25A38Q96DW6 304 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 CCDC140Q96MF4 163 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 OR2A7Q96R45 310 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 SPIN2AQ99865 258 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 SPIN2BQ9BPZ2 258 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 DCUN1D5Q9BTE7 237 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 CENPOQ9BU64 300 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 WFDC10AQ9H1F0 79 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 HIPK2Q9H2X6 1198 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 PLEKHA3Q9HB20 300 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 CCL28Q9NRJ3 127 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 SLC2A9Q9NRM0 540 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 TAS2R8Q9NYW2 309 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 BLOC1S6Q9UL45 172 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 RRP15Q9Y3B9 282 aaKnown RBP5.29□□□□□ -1.56
HDAC3-207ENST00000475549 S4R3C0 116 aa5.29□□□□□ -1.56
HDAC3-207ENST00000475549 TRAV18A0A075B6X5 111 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 TRAV3A0A0B4J244 114 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 C2orf70A6NJV1 201 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 NPIPB5A8MRT5 1133 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 MPPED1O15442 326 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 TNFSF12O43508 249 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 AIREO43918 545 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 ACTL6BO94805 426 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 KBTBD11O94819 623 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 FCER2P06734 321 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 FOLR2P14207 255 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 CTRB1P17538 263 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 PSMB9P28065 219 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 FCGR2CP31995 323 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 OR2B8PP59922 312 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 ARL6IP1Q15041 203 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 TATDN3Q17R31 274 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 CTRB2Q6GPI1 263 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 LCN12Q6JVE5 192 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 SSX9Q7RTT3 188 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 GTSCR1Q86UQ5 136 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 GPHB5Q86YW7 130 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 MMD2Q8IY49 270 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 LINC00528Q8N1L1 170 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 DEFB125Q8N687 156 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 CACNG8Q8WXS5 425 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 WDR89Q96FK6 387 aaPredicted RBP5.28□□□□□ -1.56
HDAC3-207ENST00000475549 FYTTD1Q96QD9 318 aaKnown RBP5.28□□□□□ -1.56
HDAC3-207ENST00000475549 HSD17B10Q99714 261 aaKnown RBP5.28□□□□□ -1.56
HDAC3-207ENST00000475549 FAM110AQ9BQ89 295 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 SPATA25Q9BR10 227 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 VCX3BQ9H321 246 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 ZC4H2Q9NQZ6 224 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 RHBDL2Q9NX52 303 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 FBXL7Q9UJT9 491 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 ZNF257Q9Y2Q1 563 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 PRELID3BQ9Y3B1 194 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 DNAH1Q9P2D7 4330 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 HYDINQ4G0P3 5121 aa5.28□□□□□ -1.56
HDAC3-207ENST00000475549 IGLV11-55A0A075B6I3 123 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 TMEM213A2RRL7 107 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 MFSD2BA6NFX1 497 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 ERICH4A6NGS2 130 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 LGALS9O00182 355 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 GGCTO75223 188 aaKnown RBP5.27□□□□□ -1.57
HDAC3-207ENST00000475549 SLC22A5O76082 557 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 ATP6V1G2O95670 118 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 REG1AP05451 166 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 CD36P16671 472 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 CBLN1P23435 193 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 PSMB6P28072 239 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 TGFBR1P36897 503 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 GNG2P59768 71 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 CD81P60033 236 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 MXD1Q05195 221 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 IDNKQ5T6J7 187 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 OR4A47Q6IF82 309 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 CLEC19AQ6UXS0 136 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 UNQ9165/PRO28630Q6UXU0 137 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 ZNF66Q6ZN08 573 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 HOGA1Q86XE5 327 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 BEST4Q8NFU0 473 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 OR13F1Q8NGS4 319 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 OR2K2Q8NGT1 345 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 OR4S2Q8NH73 311 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 TCTEX1D2Q8WW35 142 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 ISOC1Q96CN7 298 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 NEURL2Q9BR09 285 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms