RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 S1PR2O95136 353 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 OPN1MWP04001 364 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 OPN1MW2P0DN77 364 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 OPN1MW3P0DN78 364 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 VDAC1P21796 283 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 MAS1LP35410 378 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 FAUP35544 74 aaKnown RBP13.25□□□□□ -0.29
SCAF11-206ENST00000474828 PIGPP57054 158 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 KIAA0141Q14154 515 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-206ENST00000474828 FXYD3Q14802 87 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 SCGB2B2Q4G0G5 96 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 OR4A47Q6IF82 309 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 IDO2Q6ZQW0 420 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 VKORC1L1Q8N0U8 176 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 ARPC1AQ92747 370 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 PARP11Q9NR21 331 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 TSSC4Q9Y5U2 329 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-206ENST00000474828 H0Y980 276 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 M0QZ24 198 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 IGKV1-39P01597 117 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 IGKV1D-39P04432 117 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 RPA2P15927 270 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 PI3P19957 117 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 SLC6A1P30531 599 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 PPP5CP53041 499 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 TMEM267Q0VDI3 215 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-206ENST00000474828 ASPHD1Q5U4P2 390 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 CLCC1Q96S66 551 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 PLXNB1O43157 2135 aa13.24□□□□□ -0.29
SCAF11-206ENST00000474828 MARCH11A6NNE9 402 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 P0C879 139 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 IL7P13232 177 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 PGAM2P15259 253 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 UCP1P25874 307 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 LPAR6P43657 344 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 C2orf68Q2NKX9 166 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 KLK9Q2XQG4 91 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 C11orf44Q8N8P7 122 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 CCDC71LQ8N9Z2 235 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 OR5M8Q8NGP6 311 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 S100ZQ8WXG8 99 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 R3HDM4Q96D70 268 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 SEC22AQ96IW7 307 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 SCGB3A2Q96PL1 93 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 KLK9Q9UKQ9 250 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 FOXA2Q9Y261 457 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-206ENST00000474828 WSB1Q9Y6I7 421 aa13.23□□□□□ -0.29
SCAF11-206ENST00000474828 NAP1L6A6NFF2 107 aa13.22□□□□□ -0.29
SCAF11-206ENST00000474828 CRYM-AS1A6NIL9 109 aa13.22□□□□□ -0.29
SCAF11-206ENST00000474828 UPK2O00526 184 aa13.22□□□□□ -0.29
SCAF11-206ENST00000474828 CDX1P47902 265 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-206ENST00000474828 RPL23AP62750 156 aaKnown RBP13.22□□□□□ -0.29
SCAF11-206ENST00000474828 LFNGQ8NES3 379 aa13.22□□□□□ -0.29
SCAF11-206ENST00000474828 SRSF12Q8WXF0 261 aaKnown RBP13.22□□□□□ -0.29
SCAF11-206ENST00000474828 GALNT14Q96FL9 552 aa13.22□□□□□ -0.29
SCAF11-206ENST00000474828 TP53RKQ96S44 253 aa13.22□□□□□ -0.29
SCAF11-206ENST00000474828 SLC25A21Q9BQT8 299 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-206ENST00000474828 C7orf50Q9BRJ6 194 aaKnown RBP13.22□□□□□ -0.29
SCAF11-206ENST00000474828 CCDC32Q9BV29 185 aa13.22□□□□□ -0.29
SCAF11-206ENST00000474828 VSIG4Q9Y279 399 aa13.22□□□□□ -0.29
SCAF11-206ENST00000474828 TNCP24821 2201 aa13.22□□□□□ -0.29
SCAF11-206ENST00000474828 TET2Q6N021 2002 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-206ENST00000474828 C3orf85A0A1B0GTC6 90 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 A0A1B0GW64 132 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 TCRBV4S1A1TA0A5B7 111 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 TEX22C9J3V5 150 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 H3BUA1 57 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 CD40LGP29965 261 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 RPL8P62917 257 aaKnown RBP13.21□□□□□ -0.29
SCAF11-206ENST00000474828 TMEM230Q96A57 120 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 SPIN2AQ99865 258 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 SPIN2BQ9BPZ2 258 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 FAM103A1Q9BTL3 118 aaKnown RBP13.21□□□□□ -0.29
SCAF11-206ENST00000474828 TMEM140Q9NV12 185 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 MCUBQ9NWR8 336 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 COPZ2Q9P299 210 aa13.21□□□□□ -0.29
SCAF11-206ENST00000474828 C14orf166Q9Y224 244 aaKnown RBP13.21□□□□□ -0.29
SCAF11-206ENST00000474828 CGB1A6NKQ9 187 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 E7EUB6 86 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 CNIH1O95406 144 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 CDS2O95674 445 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 HLA-GP17693 338 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 BTCP35070 178 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 RUNX1Q01196 453 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 TRIQKQ629K1 86 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 HIST2H2BDQ6DRA6 164 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 GLYATL2Q8WU03 294 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 SRSF8Q9BRL6 282 aaKnown RBP13.2□□□□□ -0.3
SCAF11-206ENST00000474828 TMEM222Q9H0R3 208 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 KLK15Q9H2R5 256 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 NAA60Q9H7X0 242 aa13.2□□□□□ -0.3
SCAF11-206ENST00000474828 MGAM2Q2M2H8 2515 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 MSGN1A6NI15 193 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 PLA2G10O15496 165 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 TSPAN15O95858 294 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 KRASP01116 189 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 RPLP1P05386 114 aaKnown RBP13.19□□□□□ -0.3
SCAF11-206ENST00000474828 RAB9AP51151 201 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms