RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 AIFM2Q9BRQ8 373 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 NPCDR1Q9BY65 106 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 TUBA4BQ9H853 241 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 CTXND1A0A1B0GTU2 59 aa8□□□□□ -1.13
USP39-214ENST00000474572 A0A1B0GV50 99 aa8□□□□□ -1.13
USP39-214ENST00000474572 C17orf112F2Z3M2 114 aa8□□□□□ -1.13
USP39-214ENST00000474572 INS-IGF2F8WCM5 200 aa8□□□□□ -1.13
USP39-214ENST00000474572 H0YJW9 148 aa8□□□□□ -1.13
USP39-214ENST00000474572 J3QR06 171 aa8□□□□□ -1.13
USP39-214ENST00000474572 RRHO14718 337 aa8□□□□□ -1.13
USP39-214ENST00000474572 MPDU1O75352 247 aa8□□□□□ -1.13
USP39-214ENST00000474572 RBP4P02753 201 aa8□□□□□ -1.13
USP39-214ENST00000474572 BCL2P10415 239 aa8□□□□□ -1.13
USP39-214ENST00000474572 ATP5IP56385 69 aaPredicted RBP8□□□□□ -1.13
USP39-214ENST00000474572 PRCDQ00LT1 54 aa8□□□□□ -1.13
USP39-214ENST00000474572 TMEM249Q2WGJ8 235 aa8□□□□□ -1.13
USP39-214ENST00000474572 BSXQ3C1V8 233 aa8□□□□□ -1.13
USP39-214ENST00000474572 C11orf71Q6IPW1 123 aa8□□□□□ -1.13
USP39-214ENST00000474572 TMEM88Q6PEY1 159 aa8□□□□□ -1.13
USP39-214ENST00000474572 ZNF841Q6ZN19 808 aa8□□□□□ -1.13
USP39-214ENST00000474572 ETV3LQ6ZN32 361 aa8□□□□□ -1.13
USP39-214ENST00000474572 C8orf46Q8TAG6 207 aa8□□□□□ -1.13
USP39-214ENST00000474572 OSR1Q8TAX0 266 aaPredicted RBP8□□□□□ -1.13
USP39-214ENST00000474572 TNFRSF14Q92956 283 aa8□□□□□ -1.13
USP39-214ENST00000474572 CLCC1Q96S66 551 aa8□□□□□ -1.13
USP39-214ENST00000474572 P2RX4Q99571 388 aa8□□□□□ -1.13
USP39-214ENST00000474572 NABP2Q9BQ15 211 aa8□□□□□ -1.13
USP39-214ENST00000474572 PCGF1Q9BSM1 259 aa8□□□□□ -1.13
USP39-214ENST00000474572 SMCO4Q9NRQ5 59 aa8□□□□□ -1.13
USP39-214ENST00000474572 ZNRD1Q9P1U0 126 aa8□□□□□ -1.13
USP39-214ENST00000474572 PRNDQ9UKY0 176 aa8□□□□□ -1.13
USP39-214ENST00000474572 MAP1LC3B2A6NCE7 125 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 SRRM4A7MD48 611 aaKnown RBP7.99□□□□□ -1.13
USP39-214ENST00000474572 SEC14L6B5MCN3 397 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 KBTBD11O94819 623 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 APOA2P02652 100 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 ATF4P18848 351 aaPredicted RBP7.99□□□□□ -1.13
USP39-214ENST00000474572 CD1BP29016 333 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 MAS1LP35410 378 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 HOXA1P49639 335 aaPredicted RBP7.99□□□□□ -1.13
USP39-214ENST00000474572 ELLP55199 621 aaPredicted RBP7.99□□□□□ -1.13
USP39-214ENST00000474572 ERVFRD-1P60508 538 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 RAB11AP62491 216 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 HAGHQ16775 308 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 SOHLH1Q5JUK2 328 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 FAM90A2PQ658T7 463 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 PDPNQ86YL7 162 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 C15orf54Q8N8G6 183 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 OR9G1Q8NH87 305 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 RXFP4Q8TDU9 374 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 CA5BP1Q8WTZ4 195 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 H1FXQ92522 213 aaKnown RBP7.99□□□□□ -1.13
USP39-214ENST00000474572 RAB1CQ92928 201 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 MRPL20Q9BYC9 149 aaKnown RBP7.99□□□□□ -1.13
USP39-214ENST00000474572 MAP1LC3BQ9GZQ8 125 aa7.99□□□□□ -1.13
USP39-214ENST00000474572 HEYLQ9NQ87 328 aaPredicted RBP7.99□□□□□ -1.13
USP39-214ENST00000474572 DIDO1Q9BTC0 2240 aaKnown RBP7.99□□□□□ -1.13
USP39-214ENST00000474572 C7orf77A4D0Y5 90 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 COLCA2A8K830 154 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 H7C2Y5 167 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 IFNA1P01562 189 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 IFNA10P01566 189 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 IGKV1-16P04430 117 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 SAA1P0DJI8 122 aaPredicted RBP7.98□□□□□ -1.13
USP39-214ENST00000474572 OR13C7P0DN81 318 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 IGHV1-8P0DP01 117 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 FOLR2P14207 255 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 COL8A2P25067 703 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 NPY1RP25929 384 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 TAGLN2P37802 199 aaKnown RBP7.98□□□□□ -1.13
USP39-214ENST00000474572 OPRK1P41145 380 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 ACOT6Q3I5F7 207 aaPredicted RBP7.98□□□□□ -1.13
USP39-214ENST00000474572 FFAR4Q5NUL3 377 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 LCN15Q6UWW0 184 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 TREML4Q6UXN2 200 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 UNQ6494/PRO21346Q6UXR6 183 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 ABHD12Q8N2K0 398 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 SLC24A4Q8NFF2 622 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 OR10G9Q8NGN4 311 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 OR10G7Q8NGN6 311 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 OR5B3Q8NH48 314 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 OR4A5Q8NH83 315 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 TMEM167AQ8TBQ9 72 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 ACTR3CQ9C0K3 210 aaPredicted RBP7.98□□□□□ -1.13
USP39-214ENST00000474572 CBLN4Q9NTU7 201 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 SLC39A9Q9NUM3 307 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 FKBP11Q9NYL4 201 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 GNG13Q9P2W3 67 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 VAX2Q9UIW0 290 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 LSM4Q9Y4Z0 139 aaKnown RBP7.98□□□□□ -1.13
USP39-214ENST00000474572 OR51B2Q9Y5P1 312 aa7.98□□□□□ -1.13
USP39-214ENST00000474572 YLPM1P49750 1951 aaKnown RBP7.98□□□□□ -1.13
USP39-214ENST00000474572 DSPP15924 2871 aaKnown RBP7.98□□□□□ -1.13
USP39-214ENST00000474572 PTPRZ1P23471 2315 aaPredicted RBP7.97□□□□□ -1.13
USP39-214ENST00000474572 A0A087WWC5 75 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 TEX50A0A1B0GTY4 177 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 IGLV1-47P01700 117 aa7.97□□□□□ -1.13
USP39-214ENST00000474572 RPS16P62249 146 aaKnown RBP7.97□□□□□ -1.13
USP39-214ENST00000474572 FLI1Q01543 452 aaPredicted RBP7.97□□□□□ -1.13
USP39-214ENST00000474572 C2orf83Q53S99 150 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms