RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 MPDZO75970 2070 aa1.68□□□□□ -2.14
PRPF40A-208ENST00000472760 DSCAMO60469 2012 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 SORL1Q92673 2214 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 CHD5Q8TDI0 1954 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 ARHGAP32A7KAX9 2087 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 OR4C45A6NMZ5 311 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 A8MUN3 132 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 H3BT86 120 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 PLA2G10O15496 165 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 LGALS1P09382 135 aaKnown RBP1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 CCL1P22362 96 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 FABP9Q0Z7S8 132 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 CLVS2Q5SYC1 327 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 SGMS2Q8NHU3 365 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 DDI1Q8WTU0 396 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 DIRAS2Q96HU8 199 aa1.67□□□□□ -2.14
PRPF40A-208ENST00000472760 DICER1Q9UPY3 1922 aaKnown RBP1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 TRAV38-1A0A0B4J264 116 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 HMSDA8MTL9 139 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 C21orf140B9A014 251 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 H7C2G1 150 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 KRT75O95678 551 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 C1QCP02747 245 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 UCHL3P15374 230 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 MAP2K4P45985 399 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 REG1BP48304 166 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 RAB13P51153 203 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 AP2S1P53680 142 aaPredicted RBP1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 TMEM155Q4W5P6 130 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 C9orf64Q5T6V5 341 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 SSX8Q7RTT4 187 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 DEFB119Q8N690 84 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 OTUD6BQ8N6M0 293 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 FAM96AQ9H5X1 160 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 XAGE1AQ9HD64 81 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 ATG2BQ96BY7 2078 aa1.66□□□□□ -2.14
PRPF40A-208ENST00000472760 TRAV7A0A075B6U4 112 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 IGHV1-18A0A0C4DH31 117 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 LST1O00453 97 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 SERPINA7P05543 415 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 TFPTP0C1Z6 253 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 MAGEA12P43365 314 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 RPL28P46779 137 aaKnown RBP1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 RAB14P61106 215 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 HIST1H4AP62805 103 aaKnown RBP1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 TNFAIP6P98066 277 aaPredicted RBP1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 TNFAIP8L3Q5GJ75 292 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 ZNF550Q7Z398 422 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 GID4Q8IVV7 300 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 NAA38Q9BRA0 125 aaKnown RBP1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 MRPL32Q9BYC8 188 aaKnown RBP1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 NAT8Q9UHE5 227 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 DISP1Q96F81 1524 aa1.65□□□□□ -2.15
PRPF40A-208ENST00000472760 NCKAP5O14513 1909 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 DOCK10Q96BY6 2186 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 FLT4P35916 1363 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 MEIKINA0A087WXM9 373 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 EVPLLA8MZ36 301 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 ACOX3O15254 700 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 NSA2O95478 260 aaKnown RBP1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 NAPSAO96009 420 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 DEFA4P12838 97 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 MSNP26038 577 aaKnown RBP1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 CCR7P32248 378 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 CSN1S1P47710 185 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 NAA20P61599 178 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 POLR2GP62487 172 aaKnown RBP eCLIP1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 EMX1Q04741 257 aaPredicted RBP1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 CDKL4Q5MAI5 379 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 CD200R1LQ6Q8B3 271 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 CST9LQ9H4G1 147 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 ANGPT4Q9Y264 503 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 C9orf84Q5VXU9 1444 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 EVC2Q86UK5 1308 aa1.64□□□□□ -2.15
PRPF40A-208ENST00000472760 WDR90Q96KV7 1748 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 I3L521 148 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 ZNF737O75373 536 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 PPBPP02775 128 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 ISG15P05161 165 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 KRT7P08729 469 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 S100A7P31151 101 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 MARCKSL1P49006 195 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 OR4D2P58180 307 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 CAV1Q03135 178 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 FAM201AQ5SY85 155 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 SLC36A1Q7Z2H8 476 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 C10orf67Q8IYJ2 551 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 DEFB125Q8N687 156 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 RNF133Q8WVZ7 376 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 ACOT12Q8WYK0 555 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 ROPN1LQ96C74 230 aa1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 NYNRINQ9P2P1 1898 aaKnown RBP1.63□□□□□ -2.15
PRPF40A-208ENST00000472760 COL4A1P02462 1669 aa1.62□□□□□ -2.15
PRPF40A-208ENST00000472760 A0A0D9SEW6 157 aa1.62□□□□□ -2.15
PRPF40A-208ENST00000472760 LEPROTO15243 131 aa1.62□□□□□ -2.15
PRPF40A-208ENST00000472760 MSMBP08118 114 aa1.62□□□□□ -2.15
PRPF40A-208ENST00000472760 FAM228BP0C875 321 aa1.62□□□□□ -2.15
PRPF40A-208ENST00000472760 CCL5P13501 91 aa1.62□□□□□ -2.15
PRPF40A-208ENST00000472760 KCNE1P15382 129 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms