RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 Q8N9W7 124 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 MITD1Q8WV92 249 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 SEC22CQ9BRL7 303 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 FKBP11Q9NYL4 201 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 SHPKQ9UHJ6 478 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 MMP24Q9Y5R2 645 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 KCNAB3O43448 404 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 CHST1O43916 411 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 KBTBD11O94819 623 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 MAS1LP35410 378 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 GNB1P62873 340 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 THOC7Q6I9Y2 204 aaKnown RBP13.42□□□□□ -0.26
CCM2-205ENST00000472223 CADM3Q8N126 398 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 FAM71E2Q8N5Q1 922 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 SLC35G3Q8N808 338 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 LRTM2Q8N967 370 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 OR52B4Q8NGK2 314 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 TMEM167AQ8TBQ9 72 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 ABHD5Q8WTS1 349 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 CHPT1Q8WUD6 406 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 LSM10Q969L4 123 aaKnown RBP13.42□□□□□ -0.26
CCM2-205ENST00000472223 RBMXL1Q96E39 390 aaKnown RBP13.42□□□□□ -0.26
CCM2-205ENST00000472223 SEC22AQ96IW7 307 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 PDCD10Q9BUL8 212 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 CACFD1Q9UGQ2 172 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 TMED3Q9Y3Q3 217 aa13.42□□□□□ -0.26
CCM2-205ENST00000472223 NIPBLQ6KC79 2804 aaeCLIP13.41□□□□□ -0.261e-6■■■■■ 35.4
CCM2-205ENST00000472223 SSNA1O43805 119 aa13.41□□□□□ -0.26
CCM2-205ENST00000472223 RPL8P62917 257 aaKnown RBP13.41□□□□□ -0.26
CCM2-205ENST00000472223 TATDN3Q17R31 274 aa13.41□□□□□ -0.26
CCM2-205ENST00000472223 ANKRD55Q3KP44 614 aa13.41□□□□□ -0.26
CCM2-205ENST00000472223 PUSL1Q8N0Z8 303 aaKnown RBP13.41□□□□□ -0.26
CCM2-205ENST00000472223 SPIN2AQ99865 258 aa13.41□□□□□ -0.26
CCM2-205ENST00000472223 SPIN2BQ9BPZ2 258 aa13.41□□□□□ -0.26
CCM2-205ENST00000472223 COMMD5Q9GZQ3 224 aa13.41□□□□□ -0.26
CCM2-205ENST00000472223 PRR13Q9NZ81 148 aa13.41□□□□□ -0.26
CCM2-205ENST00000472223 PRNDQ9UKY0 176 aa13.41□□□□□ -0.26
CCM2-205ENST00000472223 UPK2O00526 184 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 IGKV1-39P01597 117 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 HLA-DRB1P01911 266 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 IGKV1D-39P04432 117 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 HOXB5P09067 269 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 TNXAQ16473 311 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 PRSS8Q16651 343 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 FBLN7Q53RD9 439 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 ZNF562Q6V9R5 426 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 LYZL2Q7Z4W2 148 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 SLC35E3Q7Z769 313 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 FOXRED2Q8IWF2 684 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 OR2T6Q8NHC8 308 aa13.4□□□□□ -0.26
CCM2-205ENST00000472223 CA2P00918 260 aa13.39□□□□□ -0.27
CCM2-205ENST00000472223 CRYGBP07316 175 aa13.39□□□□□ -0.27
CCM2-205ENST00000472223 FGF2P09038 288 aa13.39□□□□□ -0.27
CCM2-205ENST00000472223 HLA-GP17693 338 aa13.39□□□□□ -0.27
CCM2-205ENST00000472223 BLCAPP62952 87 aa13.39□□□□□ -0.27
CCM2-205ENST00000472223 LURAP1LQ8IV03 231 aa13.39□□□□□ -0.27
CCM2-205ENST00000472223 MRPL41Q8IXM3 137 aaKnown RBP13.39□□□□□ -0.27
CCM2-205ENST00000472223 LHFPL5Q8TAF8 219 aa13.39□□□□□ -0.27
CCM2-205ENST00000472223 ZNF430Q9H8G1 570 aaPredicted RBP13.39□□□□□ -0.27
CCM2-205ENST00000472223 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.39□□□□□ -0.27
CCM2-205ENST00000472223 IGKV1-5P01602 117 aa13.38□□□□□ -0.27
CCM2-205ENST00000472223 SULT1A3P0DMM9 295 aa13.38□□□□□ -0.27
CCM2-205ENST00000472223 SULT1A4P0DMN0 295 aa13.38□□□□□ -0.27
CCM2-205ENST00000472223 TMEM267Q0VDI3 215 aaPredicted RBP13.38□□□□□ -0.27
CCM2-205ENST00000472223 FXYD3Q14802 87 aa13.38□□□□□ -0.27
CCM2-205ENST00000472223 OR4F5Q8NH21 305 aa13.38□□□□□ -0.27
CCM2-205ENST00000472223 GON7Q9BXV9 100 aa13.38□□□□□ -0.27
CCM2-205ENST00000472223 OR51J1Q9H342 316 aa13.38□□□□□ -0.27
CCM2-205ENST00000472223 A0A1B0GU03 582 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 C5orf51A6NDU8 294 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 FAM25EA8MYX2 175 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 FCN1O00602 326 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 IFNA17P01571 189 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 AMY1AP04745 511 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 VDAC2P45880 294 aaPredicted RBP13.37□□□□□ -0.27
CCM2-205ENST00000472223 CX3CL1P78423 397 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 SMCO1Q147U7 214 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 GGNBP1Q5YKI7 109 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 OR1S1Q8NH92 325 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 ARPC1AQ92747 370 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 GPR146Q96CH1 333 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 PARP11Q9NR21 331 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 TPSG1Q9NRR2 321 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 OR51B2Q9Y5P1 312 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 ALG5Q9Y673 324 aa13.37□□□□□ -0.27
CCM2-205ENST00000472223 C13orf42A0A1B0GVH6 325 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 SH2D7A6NKC9 451 aaPredicted RBP13.36□□□□□ -0.27
CCM2-205ENST00000472223 AP4M1O00189 453 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 TSPAN9O75954 239 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 IGHG2P01859 326 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 OR9G9P0C7N8 305 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 SLC25A6P12236 298 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 RPL27AP46776 148 aaKnown RBP13.36□□□□□ -0.27
CCM2-205ENST00000472223 PJVKQ0ZLH3 352 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 GSG1LQ6UXU4 331 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 OR1L8Q8NGR8 309 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 OR5B3Q8NH48 314 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 GRPEL2Q8TAA5 225 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 MED28Q9H204 178 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms