RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 YPEL4Q96NS1 127 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 COL6A6A6NMZ7 2263 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 ATRXP46100 2492 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 PPIHO43447 177 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 ZG16O60844 167 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 OR9G9P0C7N8 305 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 PMS2P11Q13670 270 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 AARDQ4LEZ3 155 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 DTD1Q8TEA8 209 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 TVP23CQ96ET8 276 aa17.84■□□□□ 0.45
PDLIM2-216ENST00000464275 LOC102723971A0A1B0GUV8 181 aa17.83■□□□□ 0.44
PDLIM2-216ENST00000464275 ARL16Q0P5N6 197 aa17.83■□□□□ 0.44
PDLIM2-216ENST00000464275 ZNF429Q86V71 674 aa17.83■□□□□ 0.44
PDLIM2-216ENST00000464275 FAM24BQ8N5W8 94 aa17.83■□□□□ 0.44
PDLIM2-216ENST00000464275 ZNF525Q8N782 197 aa17.83■□□□□ 0.44
PDLIM2-216ENST00000464275 A0A1W2PPE2 198 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 FSTL3O95633 263 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 S100A9P06702 114 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 CCL3L1P16619 93 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 HAGHQ16775 308 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 LRRC75BQ2VPJ9 315 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 RAB39BQ96DA2 213 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 TIMM9Q9Y5J7 89 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 RFNGQ9Y644 331 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 LY86O95711 162 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 PNRC1Q12796 327 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 LILRB2Q8N423 598 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 OR4A16Q8NH70 328 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 P2RX4Q99571 388 aa17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 QTRT1Q9BXR0 403 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-216ENST00000464275 CEBPZOSA8MTT3 80 aa17.81■□□□□ 0.44
PDLIM2-216ENST00000464275 EIF3GO75821 320 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDLIM2-216ENST00000464275 IGHV2-5P01817 119 aa17.81■□□□□ 0.44
PDLIM2-216ENST00000464275 SSX9Q7RTT3 188 aa17.81■□□□□ 0.44
PDLIM2-216ENST00000464275 ZNF383Q8NA42 475 aa17.81■□□□□ 0.44
PDLIM2-216ENST00000464275 OR4C12Q96R67 309 aa17.81■□□□□ 0.44
PDLIM2-216ENST00000464275 NDUFS6O75380 124 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 ARG1P05089 322 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 COL8A2P25067 703 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 TAGLN2P37802 199 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 CYB561D1Q8N8Q1 229 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 OR52E5Q8NH55 327 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 hCG_1809904A0A1W2PP81 198 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 A0A1W2PR64 198 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 A0A1W2PRV1 198 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 PCP4L1A6NKN8 68 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 IFNA1P01562 189 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 SLC38A11Q08AI6 406 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 ATP6V1FQ16864 119 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 ZDHHC16Q969W1 377 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 TMEM140Q9NV12 185 aa17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 ANKHD1Q8IWZ3 2542 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-216ENST00000464275 BCL2P10415 239 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 PLA2G5P39877 138 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 SPCS3P61009 180 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 RELBQ01201 579 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 CBLN4Q9NTU7 201 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 NCOR2Q9Y618 2525 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 AP4M1O00189 453 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 OR2B8PP59922 312 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 ERVFRD-1P60508 538 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 C4orf17Q53FE4 359 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 TMEM41BQ5BJD5 291 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 ZNF787Q6DD87 383 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 ZNF833PQ6ZTB9 187 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 C8orf31Q8N9H6 132 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 WDR61Q9GZS3 305 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 RAB1BQ9H0U4 201 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 RPRMQ9NS64 109 aa17.79■□□□□ 0.44
PDLIM2-216ENST00000464275 TRBV23-1A0A0A0MS06 115 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 LYNX1G3V0Z9 82 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 CT45A6P0DMU7 189 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 CT45A5P0DMU8 189 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 CT45A7P0DMV0 189 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 LYNX1P0DP58 116 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 DLX6P56179 175 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 DLK1P80370 383 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 TMEM155Q4W5P6 130 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 PDLIM3Q53GG5 364 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 OR8G2PQ6IF36 304 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 CENPVQ7Z7K6 275 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 VKORC1L1Q8N0U8 176 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 TMEM242Q9NWH2 141 aa17.78■□□□□ 0.44
PDLIM2-216ENST00000464275 PMS2P5A8MQ11 134 aa17.77■□□□□ 0.44
PDLIM2-216ENST00000464275 HRASP01112 189 aa17.77■□□□□ 0.44
PDLIM2-216ENST00000464275 IGHV2-70P01814 119 aa17.77■□□□□ 0.44
PDLIM2-216ENST00000464275 POU2AF1Q16633 256 aa17.77■□□□□ 0.44
PDLIM2-216ENST00000464275 LINC00311Q8N616 119 aa17.77■□□□□ 0.44
PDLIM2-216ENST00000464275 ZNF596Q8TC21 504 aa17.77■□□□□ 0.44
PDLIM2-216ENST00000464275 CHD8Q9HCK8 2581 aa17.77■□□□□ 0.43
PDLIM2-216ENST00000464275 TGOLN2O43493 480 aa17.77■□□□□ 0.43
PDLIM2-216ENST00000464275 CTAG1AP78358 180 aa17.77■□□□□ 0.43
PDLIM2-216ENST00000464275 FABP9Q0Z7S8 132 aa17.77■□□□□ 0.43
PDLIM2-216ENST00000464275 RTL8BQ17RB0 113 aa17.77■□□□□ 0.43
PDLIM2-216ENST00000464275 RHOVQ96L33 236 aa17.77■□□□□ 0.43
PDLIM2-216ENST00000464275 RSG1Q9BU20 258 aa17.77■□□□□ 0.43
PDLIM2-216ENST00000464275 SLC35D1Q9NTN3 355 aa17.77■□□□□ 0.43
PDLIM2-216ENST00000464275 SPINK9Q5DT21 86 aa17.76■□□□□ 0.43
PDLIM2-216ENST00000464275 OR10P1Q8NGE3 313 aa17.76■□□□□ 0.43
PDLIM2-216ENST00000464275 GNG13Q9P2W3 67 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms