RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 LPAR6P43657 344 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 CDX1P47902 265 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 RND3P61587 244 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 TNXAQ16473 311 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 KHDC1LQ5JSQ8 128 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SPANXN2Q5MJ10 180 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 ASPHD1Q5U4P2 390 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 OR4A47Q6IF82 309 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SSX9Q7RTT3 188 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 MMD2Q8IY49 270 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 OR4F17Q8NGA8 305 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 GRPEL2Q8TAA5 225 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 MARCH1Q8TCQ1 289 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 OR4F4Q96R69 305 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SLC2A9Q9NRM0 540 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 FAM212BQ9NTI7 297 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 BET1LQ9NYM9 111 aa12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP3-208ENST00000464263 MSGN1A6NI15 193 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 MPPED1O15442 326 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 S100GP29377 79 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 RAB9AP51151 201 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 PPP5CP53041 499 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 KLF9Q13886 244 aaPredicted RBP12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 TMEM65Q6PI78 240 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 OR13C8Q8NGS7 320 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 OR4A5Q8NH83 315 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 ZFAND1Q8TCF1 268 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SRSF12Q8WXF0 261 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 TMEM68Q96MH6 324 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SRRQ9GZT4 340 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SLC2A8Q9NY64 477 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 COMMD9Q9P000 198 aa12.01□□□□□ -0.49
RAB11FIP3-208ENST00000464263 CREBL2O60519 120 aaPredicted RBP12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 PF4V1P10720 104 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SLC6A1P30531 599 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 MAS1LP35410 378 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 PIGPP57054 158 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 ZNF695Q8IW36 515 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 CADM3Q8N126 398 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 ZNF491Q8N8L2 437 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 KLHL30-AS1Q8NEE0 82 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 OR51S1Q8NGJ8 323 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 OR5M8Q8NGP6 311 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 PRRT1Q99946 306 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 GPR132Q9UNW8 380 aa12□□□□□ -0.49
RAB11FIP3-208ENST00000464263 TRAV3A0A0B4J244 114 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 E7EUB6 86 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 UPK2O00526 184 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 ACTL6BO94805 426 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 CTSDP07339 412 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 ECI1P42126 302 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SURF2Q15527 256 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 C10orf55Q5SWW7 151 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 C8orf86Q6ZUL3 223 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 TOMM5Q8N4H5 51 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 OR5T1Q8NG75 326 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 CASTOR1Q8WTX7 329 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 UBE2E2Q96LR5 201 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SDHCQ99643 169 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 RTBDNQ9BSG5 229 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 HRASLSQ9HDD0 168 aa11.99□□□□□ -0.49
RAB11FIP3-208ENST00000464263 A0A1B0GW64 132 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 BRI3O95415 125 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 KRASP01116 189 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 IGKV1-39P01597 117 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 IGKV1D-39P04432 117 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 RPA2P15927 270 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 AP3S2P59780 193 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 RPL8P62917 257 aaKnown RBP11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 BAK1Q16611 211 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 CNPY1Q3B7I2 92 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 ETV3LQ6ZN32 361 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 GDPD1Q8N9F7 314 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 WFDC9Q8NEX5 89 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 DMBX1Q8NFW5 382 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 TP53RKQ96S44 253 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 C5orf66Q9H5L9 145 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 TMEM140Q9NV12 185 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 MCUBQ9NWR8 336 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SCP2D1Q9UJQ7 156 aa11.98□□□□□ -0.49
RAB11FIP3-208ENST00000464263 C3orf85A0A1B0GTC6 90 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 CGB1A6NKQ9 187 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 MARCH11A6NNE9 402 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 NUDT19A8MXV4 375 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 TEX22C9J3V5 150 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 H0Y980 276 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 FGF2P09038 288 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 APELAP0DMC3 54 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 MYOD1P15172 320 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 HLA-GP17693 338 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 G6PCP35575 357 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 RPL27AP46776 148 aaKnown RBP11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 ZNF45Q02386 682 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 CCDC71LQ8N9Z2 235 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 C4orf3Q8WVX3 66 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 DEDD2Q8WXF8 326 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 RAX2Q96IS3 184 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 SEC22AQ96IW7 307 aa11.97□□□□□ -0.49
RAB11FIP3-208ENST00000464263 MS4A10Q96PG2 267 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms